AF_AFB1VDL4F1

Computed structure model of Alanine--tRNA ligase

Refer to the legend below to interpret the coloring by pLDDT confidence scores.

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Welcome
RCSB PDB Mol* Viewer 2.11.2 [1/27/2025, 4:56:27 PM]
Sequence of
1    ​M​​Q​​T​​H​​E​​I​​R​​Q​​R​​F​11   ​T​​D​​H​​F​​V​​K​​S​​G​​H​​T​21   ​E​​V​​P​​S​​A​​S​​L​​I​​L​​D​31   ​D​​P​​N​​L​​L​​F​​V​​N​​A​​G​41   ​M​​V​​P​​F​​K​​P​​Y​​F​​L​​G​51   ​Q​​E​​T​​P​​P​​F​​G​​T​​A​​T​61   ​S​​I​​Q​​K​​C​​V​​R​​T​​L​​D​71   ​I​​D​​E​​V​​G​​I​​T​​T​​R​​H​81   ​N​​T​​F​​F​​Q​​M​​A​​G​​N​​F​91   ​S​​F​​G​​Q​​Y​​F​​K​​E​​G​​A​101  ​I​​K​​N​​A​​W​​T​​L​​L​​T​​N​111  ​S​​V​​D​​D​​G​​G​​L​​G​​L​​N​121  ​P​​D​​R​​L​​W​​V​​T​​V​​Y​​E​131  ​D​​D​​D​​E​​A​​A​​Q​​L​​W​​H​141  ​D​​L​​V​​G​​L​​P​​T​​E​​R​​I​151  ​Q​​R​​L​​G​​M​​E​​D​​N​​Y​​W​161  ​H​​M​​G​​V​​P​​G​​P​​C​​G​​P​171  ​C​​S​​E​​I​​Y​​Y​​D​​R​​G​​P​181  ​A​​Y​​G​​E​​D​​G​​G​​P​​A​​V​191  ​D​​D​​S​​R​​F​​I​​E​​I​​W​​N​201  ​L​​V​​F​​M​​E​​F​​E​​R​​G​​E​211  ​T​​K​​P​​D​​G​​S​​F​​D​​I​​V​221  ​G​​N​​L​​P​​K​​K​​N​​I​​D​​T​231  ​G​​M​​G​​V​​E​​R​​L​​A​​F​​L​241  ​L​​Q​​G​​V​​D​​N​​V​​Y​​E​​T​251  ​D​​L​​L​​R​​P​​V​​I​​D​​T​​A​261  ​E​​K​​L​​T​​G​​T​​R​​Y​​G​​T​271  ​Q​​D​​K​​D​​D​​I​​R​​F​​R​​V​281  ​I​​A​​D​​H​​S​​R​​T​​A​​L​​M​291  ​L​​I​​L​​D​​G​​V​​T​​P​​G​​N​301  ​E​​G​​R​​G​​Y​​I​​L​​R​​R​​L​311  ​I​​R​​R​​I​​I​​R​​S​​A​​R​​L​321  ​L​​G​​A​​Q​​G​​A​​V​​I​​E​​Q​331  ​L​​L​​G​​T​​V​​R​​E​​A​​M​​T​341  ​P​​S​​Y​​P​​E​​I​​E​​E​​N​​W​351  ​E​​R​​I​​R​​S​​V​​G​​V​​T​​E​361  ​E​​K​​A​​F​​L​​K​​T​​L​​E​​S​371  ​G​​S​​Q​​L​​F​​E​​Q​​F​​L​​T​381  ​E​​A​​R​​N​​S​​G​​T​​S​​V​​V​391  ​P​​G​​A​​V​​A​​F​​S​​L​​H​​D​401  ​T​​H​​G​​F​​P​​I​​D​​L​​T​​R​411  ​E​​M​​A​​E​​E​​A​​S​​L​​T​​V​421  ​D​​E​​A​​G​​F​​H​​E​​L​​M​​A​431  ​E​​Q​​K​​A​​R​​A​​K​​A​​D​​S​441  ​A​​A​​K​​K​​H​​V​​H​​A​​D​​L​451  ​S​​V​​Y​​R​​A​​F​​I​​D​​S​​H​461  ​P​​T​​H​​F​​T​​G​​Y​​E​​N​​T​471  ​A​​D​​E​​G​​K​​V​​L​​G​​L​​I​481  ​V​​D​​G​​Q​​L​​A​​D​​R​​A​​S​491  ​A​​G​​Q​​H​​A​​Q​​V​​I​​L​​D​501  ​Q​​T​​P​​F​​Y​​A​​E​​S​​G​​G​511  ​Q​​M​​A​​D​​R​​G​​S​​L​​R​​G​521  ​P​​G​​G​​L​​A​​K​​V​​V​​D​​V​531  ​Q​​K​​I​​A​​K​​K​​V​​W​​A​​H​541  ​L​​I​​E​​V​​T​​E​​G​​E​​L​​A​551  ​I​​G​​E​​L​​L​​E​​A​​R​​V​​D​561  ​Q​​K​​W​​R​​H​​Q​​A​​R​​Q​​A​571  ​H​​S​​G​​T​​H​​L​​I​​H​​A​​A​581  ​L​​R​​E​​V​​L​​G​​P​​T​​A​​V​591  ​Q​​A​​G​​S​​M​​N​​K​​P​​G​​Y​601  ​L​​R​​F​​D​​F​​S​​Y​​G​​D​​Q​611  ​L​​T​​E​​K​​Q​​L​​Q​​Q​​I​​E​621  ​E​​I​​A​​N​​S​​A​​V​​D​​T​​D​631  ​Y​​Q​​V​​N​​T​​I​​E​​T​​S​​L​641  ​E​​E​​A​​K​​A​​M​​G​​A​​M​​A​651  ​L​​F​​G​​E​​N​​Y​​G​​K​​Q​​V​661  ​R​​V​​V​​E​​I​​G​​G​​P​​F​​S​671  ​M​​E​​L​​C​​G​​G​​I​​H​​V​​D​681  ​H​​S​​S​​Q​​I​​G​​P​​I​​S​​V​691  ​L​​G​​E​​S​​S​​V​​G​​S​​G​​V​701  ​R​​R​​I​​E​​A​​Y​​T​​G​​M​​D​711  ​S​​F​​R​​H​​L​​A​​A​​D​​R​​S​721  ​L​​V​​A​​N​​L​​A​​A​​N​​F​​K​731  ​A​​T​​S​​E​​E​​I​​P​​E​​R​​I​741  ​D​​A​​L​​T​​A​​K​​L​​K​​A​​A​751  ​E​​K​​Q​​V​​Q​​Q​​L​​R​​A​​Q​761  ​Q​​L​​A​​A​​Q​​V​​G​​S​​I​​V​771  ​D​​S​​A​​A​​D​​V​​S​​G​​V​​K​781  ​V​​L​​T​​Q​​N​​L​​G​​E​​G​​L​791  ​G​​A​​K​​E​​L​​R​​S​​V​​A​​Q​801  ​D​​A​​I​​A​​R​​F​​N​​S​​E​​T​811  ​A​​V​​V​​L​​F​​T​​S​​Q​​D​​G​821  ​E​​K​​V​​P​​F​​V​​A​​A​​A​​N​831  ​P​​Q​​A​​V​​E​​R​​G​​L​​K​​A​841  ​G​​D​​L​​V​​K​​A​​F​​G​​A​​E​851  ​V​​G​​G​​R​​G​​G​​G​​K​​P​​A​861  ​L​​A​​Q​​G​​S​​G​​S​​D​​A​​S​871  ​G​​V​​D​​A​​G​​L​​A​​A​​V​​Q​881  ​R​​L​​V​​N​​E​​I​​L​​S​
Type

Model Confidence 
  •   Very high (pLDDT > 90)    
  •   Confident (70 < pLDDT ≤ 90)    
  •   Low (50 < pLDDT ≤ 70)    
  •   Very low (pLDDT ≤ 50)    

Computed Structure Models provide per-residue confidence score (pLDDT) between 0 and 100. Some regions below 50 pLDDT may be unstructured in isolation.

Citation:

See Citation Policies for referencing Mol*, RCSB PDB, PDB structures, and Computed Structure Models.