1ECF
ESCHERICHIA COLI GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE (PRPP) AMIDOTRANSFERASE
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1ecfa1 | Alpha and beta proteins (a/b) | PRTase-like | PRTase-like | Phosphoribosyltransferases (PRTases) | Glutamine PRPP amidotransferase, C-terminal domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
A | d1ecfa2 | Alpha and beta proteins (a+b) | Ntn hydrolase-like | N-terminal nucleophile aminohydrolases (Ntn hydrolases) | Class II glutamine amidotransferases | Glutamine PRPP amidotransferase, N-terminal domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
B | d1ecfb1 | Alpha and beta proteins (a/b) | PRTase-like | PRTase-like | Phosphoribosyltransferases (PRTases) | Glutamine PRPP amidotransferase, C-terminal domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
B | d1ecfb2 | Alpha and beta proteins (a+b) | Ntn hydrolase-like | N-terminal nucleophile aminohydrolases (Ntn hydrolases) | Class II glutamine amidotransferases | Glutamine PRPP amidotransferase, N-terminal domain | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Phosphoribosyltransferases (PRTases) | 8019843 | 4000253 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Alpha subunit of glutamate synthase, GAT domain-like | 8024370 | 4000340 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | PRTase-like | 8032223 | 3000060 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Class II glutamine amidotransferases | 8036749 | 3000131 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | PRTase-like | 8032223 | 3000060 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Class II glutamine amidotransferases | 8036749 | 3000131 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | GATase_2_1st | e1ecfA1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Class II glutamine amidotransferases | F: GATase_2_1st | ECOD (1.6) |
A | Pribosyltran | e1ecfA2 | A: a/b three-layered sandwiches | X: PRTase-like (From Topology) | H: PRTase-like (From Topology) | T: PRTase-like | F: Pribosyltran | ECOD (1.6) |
B | GATase_2_1st | e1ecfB1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Class II glutamine amidotransferases | F: GATase_2_1st | ECOD (1.6) |
B | Pribosyltran | e1ecfB2 | A: a/b three-layered sandwiches | X: PRTase-like (From Topology) | H: PRTase-like (From Topology) | T: PRTase-like | F: Pribosyltran | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.60.20.10 | Alpha Beta | 4-Layer Sandwich | Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 | Aminohydrolase, N-terminal nucleophile (Ntn) domain | CATH (4.3.0) |
A | 3.40.50.2020 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
B | 3.60.20.10 | Alpha Beta | 4-Layer Sandwich | Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 | Aminohydrolase, N-terminal nucleophile (Ntn) domain | CATH (4.3.0) |
B | 3.40.50.2020 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00156 | Phosphoribosyl transferase domain (Pribosyltran) | Phosphoribosyl transferase domain | This family includes a range of diverse phosphoribosyl transferase enzymes. This family includes: Adenine phosphoribosyl-transferase EC:2.4.2.7, Swiss:P07672. Hypoxanthine-guanine-xanthine phosphoribosyl-transferase Swiss:P51900. Hypoxanthine phosph ... | Domain | |
PF13522 | Glutamine amidotransferase domain (GATase_6) | Glutamine amidotransferase domain | This domain is a class-II glutamine amidotransferase domain found in a variety of enzymes, such as asparagine synthetase and glutamine--fructose-6-phosphate transaminase. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029055 | Nucleophile aminohydrolases, N-terminal | Homologous Superfamily | |
IPR000836 | Phosphoribosyltransferase domain | Domain | |
IPR035584 | Amidophosphoribosyltransferase, N-terminal | Domain | |
IPR005854 | Amidophosphoribosyltransferase | Family | |
IPR017932 | Glutamine amidotransferase type 2 domain | Domain | |
IPR029057 | Phosphoribosyltransferase-like | Homologous Superfamily |
Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage
Chains | Enzyme Name | Description | Catalytic Residues |
---|---|---|---|
amidophosphoribosyltransferase M-CSA #214 | Glutamine phosphoribosylpyrophosphate amido transferase (GPATase) catalyses the transfer of the glutamine amide nitrogen to phosphoribosylpyrophosphate to generate phosphoribosylamine, pyrophosphate and glutamate. The enzyme is a member of a family of proteins which utilise the amide nitrogen of glutamate for the biosynthesis of amino acids, nucleotides, amino sugars and coenzymes. The coupling of phosphoribosyl transferase and glutaminase actities in an enzyme is not frequently seen but required for de novo purine synthesis. | Defined by 5 residues: CYS:A-1GLY:A-27ASN:A-101GLY:A-102TYR:A-258 | EC: 2.4.2.14 (PDB Primary Data) |