1K5J
The Crystal Structure of Nucleoplasmin-Core
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2 Family | Nucleoplasmin-like core domain | 8025451 | 4003012 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Nucleoplasmin-like core domain | 8037830 | 3002011 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | Nucleoplasmin-like core domain | 8037830 | 3002011 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Nucleoplasmin-like core domain | 8037830 | 3002011 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Nucleoplasmin-like core domain | 8037830 | 3002011 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Nucleoplasmin-like core domain | 8037830 | 3002011 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Nucleoplasmin | e1k5jB1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Nucleoplasmin | ECOD (1.6) |
C | Nucleoplasmin | e1k5jC1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Nucleoplasmin | ECOD (1.6) |
D | Nucleoplasmin | e1k5jD1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Nucleoplasmin | ECOD (1.6) |
E | Nucleoplasmin | e1k5jE1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Nucleoplasmin | ECOD (1.6) |
A | Nucleoplasmin | e1k5jA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Nucleoplasmin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.60.120.340 | Mainly Beta | Sandwich | Jelly Rolls | Nucleoplasmin core domain | CATH (4.3.0) |
C | 2.60.120.340 | Mainly Beta | Sandwich | Jelly Rolls | Nucleoplasmin core domain | CATH (4.3.0) |
D | 2.60.120.340 | Mainly Beta | Sandwich | Jelly Rolls | Nucleoplasmin core domain | CATH (4.3.0) |
E | 2.60.120.340 | Mainly Beta | Sandwich | Jelly Rolls | Nucleoplasmin core domain | CATH (4.3.0) |
A | 2.60.120.340 | Mainly Beta | Sandwich | Jelly Rolls | Nucleoplasmin core domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03066 | Nucleoplasmin/nucleophosmin domain (Nucleoplasmin) | Nucleoplasmin/nucleophosmin domain | Nucleoplasmins are also known as chromatin decondensation proteins. They bind to core histones and transfer DNA to them in a reaction that requires ATP. This is thought to play a role in the assembly of regular nucleosomal arrays. | Domain |