Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyDDB1-like 8044839 4004169 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyWD40 repeat-like 8052530 3001694 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyWD40 repeat-like 8051194 3001694 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyWD40 repeat-like 8052531 3001694 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyWD40 repeat-like 8051194 3001694 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyWD40 repeat-like 8052530 3001694 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyWD40 repeat-like 8052531 3001694 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyWD40 repeat-like 8052530 3001694 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACPSF_A_Ne2b5lA6 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: CPSF_A_NECOD (1.6)
AMMS1_N_Ce2b5lA7 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_N_CECOD (1.6)
AMMS1_N_Ne2b5lA8 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_N_NECOD (1.6)
ACPSF_A_Ce2b5lA1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: CPSF_A_CECOD (1.6)
BCPSF_A_Ne2b5lB5 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: CPSF_A_NECOD (1.6)
BMMS1_N_Ce2b5lB6 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_N_CECOD (1.6)
BMMS1_N_Ne2b5lB7 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_N_NECOD (1.6)
BCPSF_A_Ce2b5lB1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: CPSF_A_CECOD (1.6)
Czf-Paramyx-Pe2b5lC1 A: a+b three layersX: Nonstructural protein V (From Topology)H: Nonstructural protein V (From Topology)T: Nonstructural protein VF: zf-Paramyx-PECOD (1.6)
Dzf-Paramyx-Pe2b5lD1 A: a+b three layersX: Nonstructural protein V (From Topology)H: Nonstructural protein V (From Topology)T: Nonstructural protein VF: zf-Paramyx-PECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (4.3.0)
A1.10.150.910 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
B2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (4.3.0)
B1.10.150.910 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF10433Mono-functional DNA-alkylating methyl methanesulfonate N-term (MMS1_N)Mono-functional DNA-alkylating methyl methanesulfonate N-term- Repeat
A, B
PF03178CPSF A subunit region (CPSF_A)CPSF A subunit region- Repeat
C, D
PF13008Zinc-binding domain of Paramyxoviridae V protein (zf-Paramyx-P)Zinc-binding domain of Paramyxoviridae V proteinThe Paramyxoviridae, which include such respiroviruses as para-influenzae and measles, produce phosphoproteins - protein P - that are integral to the polymerase transcription-replication complex. Protein P consists of two functionally distinct moieti ...The Paramyxoviridae, which include such respiroviruses as para-influenzae and measles, produce phosphoproteins - protein P - that are integral to the polymerase transcription-replication complex. Protein P consists of two functionally distinct moieties, an N-terminal PNT, and a C-terminal PCT [1]. The P gene region transcribes proteins from all three ORFs, and the V protein consists of the PNT moiety and a more C-terminal 2-zinc-binding domain. This conserved region consists of the two-zinc-binding section sandwiched between beta sheets 6 and 7 of the overall V protein. It is the binding of this core domain of V protein with the DDB1 protein (part of the ubiquitin-ligase complex) of eukaryotes which represents the key element of the virus-host protein interaction [3]. In the Henipavirus family which includes Nipah and Hendra viruses, the V protein is able to block IFN (interferon) signalling by preventing IFN-induced STAT phosphorylation and nuclear translocation [2]. The P gene of morbillivirus is co-transcriptionally edited leading to a V protein being produced.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
damage-specific DNA binding protein 1
C, D
Nonstructural protein V