Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyThioredoxin reductase-like 8091758 3000050 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyBfd-like 8091762 3002540 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyFolate-binding domain-like 8091764 3000025 SCOP2B (2022-06-29)
ASCOP2B Superfamily2Fe-2S ferredoxin-like 8091760 3000113 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyAminomethyltransferase beta-barrel domain-like 8091765 3000024 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyFlavoreductase-like 8064390 3000055 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyFolate-binding domain-like 8090859 3000025 SCOP2B (2022-06-29)
DSCOP2B SuperfamilySarcosine oxidase delta subunit-like 8090856 3002464 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AGCV_T_Ce2gahA3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Aminomethyltransferase beta-barrel domainF: GCV_T_CECOD (1.6)
AsoxAe2gahA4 A: alpha arraysX: HTHH: bacterioferritin-associated ferredoxin (From Topology)T: bacterioferritin-associated ferredoxinF: soxAECOD (1.6)
AUNK_F_TYPEe2gahA5 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: UNK_F_TYPEECOD (1.6)
AGCV_T_Ne2gahA7 A: a+b two layersX: Alpha-beta plaitsH: Aminomethyltransferase folate-binding domain (From Topology)T: Aminomethyltransferase folate-binding domainF: GCV_T_NECOD (1.6)
AGCV_T_N1e2gahA6 A: a+b two layersX: Alpha-beta plaitsH: Aminomethyltransferase folate-binding domain (From Topology)T: Aminomethyltransferase folate-binding domainF: GCV_T_N1ECOD (1.6)
AFAD_binding_3_1ste2gahA8 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Nucleotide-binding domainF: FAD_binding_3_1stECOD (1.6)
BDAO_2nd_1e2gahB2 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: FAD-linked reductases-C (From Topology)T: FAD-linked reductases-CF: DAO_2nd_1ECOD (1.6)
BFAD_binding_3_1ste2gahB1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: FAD/NAD(P)-binding domainF: FAD_binding_3_1stECOD (1.6)
CSoxGe2gahC1 A: a+b two layersX: Alpha-beta plaitsH: Aminomethyltransferase folate-binding domain (From Topology)T: Aminomethyltransferase folate-binding domainF: SoxGECOD (1.6)
DSoxDe2gahD1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: SoxDECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF17806Sarcosine oxidase A3 domain (SO_alpha_A3)Sarcosine oxidase A3 domainThis short domain is found in Heterotetrameric Sarcosine Oxidase's alpha A3 domain [1]. This domain binds to FMN in sarcosine oxidase. This domain is related to Pfam:PF04324 but lacks its iron binding cysteine residues.Domain
PF07992Pyridine nucleotide-disulphide oxidoreductase (Pyr_redox_2)Pyridine nucleotide-disulphide oxidoreductaseThis family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.Domain
PF01571Aminomethyltransferase folate-binding domain (GCV_T)Aminomethyltransferase folate-binding domainThis is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyses the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl tran ...This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyses the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl transferase.
Domain
PF135102Fe-2S iron-sulfur cluster binding domain (Fer2_4)2Fe-2S iron-sulfur cluster binding domainThe 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which a beta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. Th ...The 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which a beta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This cluster appears within sarcosine oxidase proteins.
Domain
PF08669Glycine cleavage T-protein C-terminal barrel domain (GCV_T_C)Glycine cleavage T-protein C-terminal barrel domainThis is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyses the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl tran ...This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyses the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl transferase.
Domain
PF01266FAD dependent oxidoreductase (DAO)FAD dependent oxidoreductaseThis family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.Domain
PF04268Sarcosine oxidase, gamma subunit family (SoxG)Sarcosine oxidase, gamma subunit family- Family
PF04267Sarcosine oxidase, delta subunit family (SoxD)Sarcosine oxidase, delta subunit family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
heterotetrameric sarcosine oxidase alpha-subunit -
heterotetrameric sarcosine oxidase beta-subunit -
heterotetrameric sarcosine oxidase gamma-subunit -
heterotetrameric sarcosine oxidase delta-subunit -