2V8H
Crystal structure of mutant E159A of beta-alanine synthase from Saccharomyces kluyveri in complex with its substrate N-carbamyl-beta- alanine
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Zn-dependent exopeptidases | 8040321 | 3000662 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Bacterial exopeptidase dimerisation domain | 8040322 | 3001194 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Zn-dependent exopeptidases | 8040321 | 3000662 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Zn-dependent exopeptidases | 8040321 | 3000662 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Bacterial exopeptidase dimerisation domain | 8040322 | 3001194 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Zn-dependent exopeptidases | 8040321 | 3000662 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Bacterial exopeptidase dimerisation domain | 8040322 | 3001194 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Zn-dependent exopeptidases | 8040321 | 3000662 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Zn-dependent exopeptidases | 8040321 | 3000662 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Zn-dependent exopeptidases | 8040321 | 3000662 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Zn-dependent exopeptidases | 8040321 | 3000662 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Bacterial exopeptidase dimerisation domain | 8040322 | 3001194 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | M20_dimer | e2v8hA1 | A: a+b two layers | X: Alpha-beta plaits | H: Bacterial exopeptidase dimerisation domain (From Topology) | T: Bacterial exopeptidase dimerisation domain | F: M20_dimer | ECOD (1.6) |
A | Peptidase_M28 | e2v8hA2 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Zn-dependent exopeptidases (From Topology) | T: Zn-dependent exopeptidases | F: Peptidase_M28 | ECOD (1.6) |
D | M20_dimer | e2v8hD1 | A: a+b two layers | X: Alpha-beta plaits | H: Bacterial exopeptidase dimerisation domain (From Topology) | T: Bacterial exopeptidase dimerisation domain | F: M20_dimer | ECOD (1.6) |
D | Peptidase_M28 | e2v8hD2 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Zn-dependent exopeptidases (From Topology) | T: Zn-dependent exopeptidases | F: Peptidase_M28 | ECOD (1.6) |
B | M20_dimer | e2v8hB1 | A: a+b two layers | X: Alpha-beta plaits | H: Bacterial exopeptidase dimerisation domain (From Topology) | T: Bacterial exopeptidase dimerisation domain | F: M20_dimer | ECOD (1.6) |
B | Peptidase_M28 | e2v8hB2 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Zn-dependent exopeptidases (From Topology) | T: Zn-dependent exopeptidases | F: Peptidase_M28 | ECOD (1.6) |
C | M20_dimer | e2v8hC1 | A: a+b two layers | X: Alpha-beta plaits | H: Bacterial exopeptidase dimerisation domain (From Topology) | T: Bacterial exopeptidase dimerisation domain | F: M20_dimer | ECOD (1.6) |
C | Peptidase_M28 | e2v8hC2 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Zn-dependent exopeptidases (From Topology) | T: Zn-dependent exopeptidases | F: Peptidase_M28 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.630.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aminopeptidase | Zn peptidases | CATH (4.3.0) |
A | 3.30.70.360 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
D | 3.40.630.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aminopeptidase | Zn peptidases | CATH (4.3.0) |
D | 3.30.70.360 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
B | 3.40.630.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aminopeptidase | Zn peptidases | CATH (4.3.0) |
B | 3.30.70.360 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
C | 3.40.630.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aminopeptidase | Zn peptidases | CATH (4.3.0) |
C | 3.30.70.360 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01546 | Peptidase family M20/M25/M40 (Peptidase_M20) | Peptidase family M20/M25/M40 | - | Family | |
PF07687 | Peptidase dimerisation domain (M20_dimer) | Peptidase dimerisation domain | This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the M20 family of peptidases [1]. This family includes a range of zinc metallopeptidases belonging to several families in the peptidase ... | Domain |