3TSZ
crystal structure of PDZ3-SH3-GUK core module from human ZO-1 in complex with 12mer peptide from human JAM-A cytoplasmic tail
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | PDZ domain-like | 8019122 | 3000388 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | SH3-domain | 8091663 | 3000153 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | P-loop nucleotide/nucleoside kinase-like | 8091662 | 3002021 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SH3_2 | e3tszA7 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_2 | ECOD (1.6) |
A | PDZ | e3tszA6 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PDZ | ECOD (1.6) |
A | Guanylate_kin | e3tszA3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Guanylate_kin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.42.10 | Mainly Beta | Roll | Pdz3 Domain | PDZ domain | CATH (4.3.0) |
A | 2.30.30.40 | Mainly Beta | Roll | SH3 type barrels. | SH3 Domains | CATH (4.3.0) |
A | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00625 | Guanylate kinase (Guanylate_kin) | Guanylate kinase | - | Domain | |
PF07653 | Variant SH3 domain (SH3_2) | Variant SH3 domain | SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase Swiss:P12931. The structure is a partly opened beta barrel. | Domain | |
PF00595 | PDZ domain (PDZ) | PDZ domain | PDZ domains are found in diverse signaling proteins. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily | |
IPR003598 | Immunoglobulin subtype 2 | Domain | |
IPR013106 | Immunoglobulin V-set domain | Domain | |
IPR003599 | Immunoglobulin domain subtype | Domain | |
IPR042456 | Junctional adhesion molecule A | Family | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR007110 | Immunoglobulin-like domain | Domain | |
IPR005417 | Tight junction protein ZO | Family | |
IPR035597 | ZO-1, SH3 domain | Domain | |
IPR036028 | SH3-like domain superfamily | Homologous Superfamily | |
IPR000906 | ZU5 domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR001452 | SH3 domain | Domain | |
IPR008144 | Guanylate kinase-like domain | Domain | |
IPR005418 | Tight junction protein ZO-1 | Family | |
IPR008145 | Guanylate kinase/L-type calcium channel beta subunit | Domain | |
IPR036034 | PDZ superfamily | Homologous Superfamily | |
IPR001478 | PDZ domain | Domain |