4GPF
Structure of the Fe3+-biliverdin-HmuO, heme oxygenase from Corynebacterium diphtheriae (data set III)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4gpfa_ | All alpha proteins | Heme oxygenase-like | Heme oxygenase-like | Eukaryotic type heme oxygenase | Heme oxygenase HmuO | (Corynebacterium diphtheriae ) [TaxId: 1717 ], | SCOPe (2.08) |
B | d4gpfb_ | All alpha proteins | Heme oxygenase-like | Heme oxygenase-like | Eukaryotic type heme oxygenase | Heme oxygenase HmuO | (Corynebacterium diphtheriae ) [TaxId: 1717 ], | SCOPe (2.08) |
C | d4gpfc_ | All alpha proteins | Heme oxygenase-like | Heme oxygenase-like | Eukaryotic type heme oxygenase | Heme oxygenase HmuO | (Corynebacterium diphtheriae ) [TaxId: 1717 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Heme oxygenase-like | 8038222 | 3001676 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Heme oxygenase-like | 8038222 | 3001676 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Heme oxygenase-like | 8038222 | 3001676 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Heme_oxygenase | e4gpfA1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Heme_oxygenase | ECOD (1.6) |
B | Heme_oxygenase | e4gpfB1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Heme_oxygenase | ECOD (1.6) |
C | Heme_oxygenase | e4gpfC1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Heme_oxygenase | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.910.10 | Mainly Alpha | Up-down Bundle | Heme Oxygenase | Chain A | CATH (4.3.0) |
B | 1.20.910.10 | Mainly Alpha | Up-down Bundle | Heme Oxygenase | Chain A | CATH (4.3.0) |
C | 1.20.910.10 | Mainly Alpha | Up-down Bundle | Heme Oxygenase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01126 | Heme oxygenase (Heme_oxygenase) | Heme oxygenase | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR018207 | Haem oxygenase conserved site | Conserved Site | |
IPR002051 | Haem oxygenase | Family | |
IPR016084 | Haem oxygenase-like, multi-helical | Homologous Superfamily | |
IPR016053 | Haem oxygenase-like | Family |