6FJ2
Structure of Thermolysin solved from SAD data collected at the peak of the Zn absorption edge on ID30B
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6fj2a_ | Alpha and beta proteins (a+b) | Zincin-like | Metalloproteases ('zincins'), catalytic domain | Thermolysin-like | Thermolysin | (Bacillus thermoproteolyticus ) [TaxId: 1427 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Peptidase_M4_C | e6fj2A1 | A: mixed a+b and a/b | X: Zincin-like | H: Metalloproteases (zincins) catalytic domain (From Topology) | T: Metalloproteases (zincins) catalytic domain | F: Peptidase_M4_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.170.10 | Alpha Beta | Roll | Elastase | domain 1 | CATH (4.3.0) |
A | 1.10.390.10 | Mainly Alpha | Orthogonal Bundle | Neutral Protease | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01447 | Thermolysin metallopeptidase, catalytic domain (Peptidase_M4) | Thermolysin metallopeptidase, catalytic domain | - | Domain | |
PF02868 | Thermolysin metallopeptidase, alpha-helical domain (Peptidase_M4_C) | Thermolysin metallopeptidase, alpha-helical domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Thermolysin |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001570 | Peptidase M4, C-terminal | Domain | |
IPR013856 | Peptidase M4 domain | Domain | |
IPR027268 | Peptidase M4/M1, CTD superfamily | Homologous Superfamily | |
IPR050728 | Extracellular Zinc Metalloprotease M4 | Family | |
IPR011096 | FTP domain | Domain | |
IPR025711 | PepSY domain | Domain | |
IPR023612 | Peptidase M4 | Family |