Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
B [auth A]d6qgra_ Multi-domain proteins (alpha and beta) HydB/Nqo4-like HydB/Nqo4-like automated matches automated matches (Methanosarcina barkeri MS ) [TaxId: 1434108 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth B]SCOP2B SuperfamilyFrhB/FdhB-like 8095209 3002602 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth A]NiFeSe_Hases_1ste6qgrA4 A: alpha complex topologyX: alpha-helical domain in nickel-iron hydrogenase, large subunit (From Topology)H: alpha-helical domain in nickel-iron hydrogenase, large subunit (From Topology)T: alpha-helical domain in nickel-iron hydrogenase, large subunitF: NiFeSe_Hases_1stECOD (1.6)
B [auth A]NiFeSe_Hases_3rd_1e6qgrA2 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: Ni-Fe binding domain in nickel-iron hydrogenase large subunit (From Topology)T: Ni-Fe binding domain in nickel-iron hydrogenase large subunitF: NiFeSe_Hases_3rd_1ECOD (1.6)
A [auth G]Fer4_21_1e6qgrG1 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_21_1ECOD (1.6)
A [auth G]Oxidored_q6e6qgrG2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: CheY-likeF: Oxidored_q6ECOD (1.6)
C [auth B]FrhB_FdhB_Ce6qgrB1 A: alpha arraysX: F420-reducing hydrogenase subunit beta (From Topology)H: F420-reducing hydrogenase subunit beta (From Topology)T: F420-reducing hydrogenase subunit betaF: FrhB_FdhB_CECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth A]1.10.645.10 Mainly Alpha Orthogonal Bundle Cytochrome-c3 Hydrogenase chain BCATH (utative)
A [auth G]3.40.50.700 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NADH:ubiquinone oxidoreductase-like, 20kDa subunitCATH (utative)
A [auth G]3.30.70.20 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (utative)
C [auth B]3.10.450.750 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth A]PF00374Nickel-dependent hydrogenase (NiFeSe_Hases)Nickel-dependent hydrogenase- Family
A [auth G]PF131874Fe-4S dicluster domain (Fer4_9)4Fe-4S dicluster domain- Family
A [auth G]PF01058NADH ubiquinone oxidoreductase, 20 Kd subunit (Oxidored_q6)NADH ubiquinone oxidoreductase, 20 Kd subunit- Family
C [auth B]PF04422Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term (FrhB_FdhB_N)Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term- Family
C [auth B]PF04432Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus (FrhB_FdhB_C)Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminusCoenzyme F420 hydrogenase (EC:1.12.99.1) reduces the low-potential two-electron acceptor coenzyme F420. This family contains the C termini of F420 hydrogenase and dehydrogenase beta subunits [1], [2]. The N terminus of Methanobacterium formicicum fo ...Coenzyme F420 hydrogenase (EC:1.12.99.1) reduces the low-potential two-electron acceptor coenzyme F420. This family contains the C termini of F420 hydrogenase and dehydrogenase beta subunits [1], [2]. The N terminus of Methanobacterium formicicum formate dehydrogenase beta chain (EC:1.2.1.2, Swiss:P06130) is also a member of this family [3]. This region is often found in association with the 4Fe-4S binding domain, fer4 (Pfam:PF00037).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth A]Coenzyme F420 hydrogenase subunit alpha - -
A [auth G]Coenzyme F420 hydrogenase subunit gamma - -
C [auth B]Coenzyme F420 hydrogenase subunit beta - -