6TPO
Conformation of cd1 nitrite reductase NirS without bound heme d1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6tpoa1 | All alpha proteins | Cytochrome c | Cytochrome c | N-terminal (heme c) domain of cytochrome cd1-nitrite reductase | N-terminal (heme c) domain of cytochrome cd1-nitrite reductase | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
A | d6tpoa2 | All beta proteins | 8-bladed beta-propeller | C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase | C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase | C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Cytochrom_D1 | e6tpoA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 8-bladed | F: Cytochrom_D1 | ECOD (1.6) |
A | Cytochrome_CBB3 | e6tpoA2 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: Cytochrome_CBB3 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02239 | Cytochrome D1 heme domain (Cytochrom_D1) | Cytochrome D1 heme domain | - | Repeat | |
PF13442 | Cytochrome C oxidase, cbb3-type, subunit III (Cytochrome_CBB3) | Cytochrome C oxidase, cbb3-type, subunit III | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036909 | Cytochrome c-like domain superfamily | Homologous Superfamily | |
IPR011048 | Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily | Homologous Superfamily | |
IPR009056 | Cytochrome c-like domain | Domain | |
IPR003143 | Cytochrome cd1-nitrite reductase, C-terminal domain superfamily | Homologous Superfamily |