Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth B]SCOP2B SuperfamilyNucleotide cyclase/DNA polymerase palm domain-like 8036908 3001272 SCOP2B (2022-06-29)
A [auth B]SCOP2B SuperfamilyNucleotide cyclase/DNA polymerase palm domain-like 8036908 3001272 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B]PF06815Reverse transcriptase connection domain (RVT_connect)Reverse transcriptase connection domainThis domain is known as the connection domain. This domain lies between the thumb and palm domains [1].Domain
A [auth B]PF00078Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1)Reverse transcriptase (RNA-dependent DNA polymerase)A reverse transcriptase gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. Reverse transcriptases occur in a variety of mobile elements, including retrotransposons, retroviruses, group II introns, bacterial msDNAs ...A reverse transcriptase gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. Reverse transcriptases occur in a variety of mobile elements, including retrotransposons, retroviruses, group II introns, bacterial msDNAs, hepadnaviruses, and caulimoviruses.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B]p51 subunit

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B]IPR036397Ribonuclease H superfamilyHomologous Superfamily
A [auth B]IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
A [auth B]IPR001995Peptidase A2A, retrovirus, catalyticDomain
A [auth B]IPR001878Zinc finger, CCHC-typeDomain
A [auth B]IPR008919Retrovirus capsid, N-terminalHomologous Superfamily
A [auth B]IPR012344Matrix protein, lentiviral and alpha-retroviral, N-terminalHomologous Superfamily
A [auth B]IPR036862Integrase, C-terminal domain superfamily, retroviralHomologous Superfamily
A [auth B]IPR018061RetropepsinsDomain
A [auth B]IPR010661Reverse transcriptase thumbDomain
A [auth B]IPR002156Ribonuclease H domainDomain
A [auth B]IPR036875Zinc finger, CCHC-type superfamilyHomologous Superfamily
A [auth B]IPR003308Integrase, N-terminal zinc-binding domainDomain
A [auth B]IPR001584Integrase, catalytic coreDomain
A [auth B]IPR045345Retroviral nucleocapsid Gag protein p24, C-terminal domainDomain
A [auth B]IPR010999Retroviral matrix proteinHomologous Superfamily
A [auth B]IPR021109Aspartic peptidase domain superfamilyHomologous Superfamily
A [auth B]IPR001969Aspartic peptidase, active siteActive Site
A [auth B]IPR012337Ribonuclease H-like superfamilyHomologous Superfamily
A [auth B]IPR017856Integrase-like, N-terminalHomologous Superfamily
A [auth B]IPR000071Immunodeficiency lentiviral matrix, N-terminalDomain
A [auth B]IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
A [auth B]IPR001037Integrase, C-terminal, retroviralDomain
A [auth B]IPR034170Retropepsin-like catalytic domainDomain
A [auth B]IPR000477Reverse transcriptase domainDomain
A [auth B]IPR010659Reverse transcriptase connectionDomain
A [auth B]IPR008916Retrovirus capsid, C-terminalHomologous Superfamily