9E7F

Cryo-EM structure of the Pyrobaculum calidifontis 70S ribosome in complex with Dri


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth 3]PF00571CBS domain (CBS)CBS domainCBS domains are small intracellular modules that pair together to form a stable globular domain [2]. This family represents a single CBS domain. Pairs of these domains have been termed a Bateman domain [6]. CBS domains have been shown to bind ligands ...Domain
E [auth AA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
E [auth AA]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
E [auth AA]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
F [auth AB]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
G [auth AC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
H [auth AD]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
H [auth AD]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
H [auth AD]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
I [auth AE]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
I [auth AE]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
J [auth AF]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
J [auth AF]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...Domain
K [auth AG]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
K [auth AG]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
L [auth AH]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
L [auth AH]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
M [auth AI]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
M [auth AI]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
N [auth AJ],
O [auth AK]
PF01965DJ-1/PfpI family (DJ-1_PfpI)DJ-1/PfpI familyThe family includes the protease PfpI Swiss:Q51732 [1]. This domain is also found in transcriptional regulators such as Swiss:Q9RJG8.Domain
P [auth AL]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
Q [auth AM]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
R [auth AN]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
S [auth AO]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
T [auth AP]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
V [auth AR]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
W [auth AS]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
X [auth AT]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
Y [auth AU]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
Z [auth AV]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
Z [auth AV]PF00467KOW motif (KOW)KOW motif- Family
AA [auth AW]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
BA [auth AX]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
CA [auth AY]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
DA [auth AZ]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...Domain
PA [auth BA]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
QA [auth BB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
RA [auth BC]PF07754Small zinc finger protein HVO_2753-like, Zn-binding pocket (HVO_2753_ZBP)Small zinc finger protein HVO_2753-like, Zn-binding pocketThis domain is found in many archaeal proteins, including HVO_2753 (also known as Small CPxCG-related zinc finger protein) from Haloferax volcanii [1]. NMR 3D structure analysis revealed the content of four C(P)XCG motifs, suggesting the presence of ...Domain
SA [auth BD]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...Domain
TA [auth BE]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
TA [auth BE]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
TA [auth BE]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...Domain
UA [auth BF]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
UA [auth BF]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
VA [auth BG]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
WA [auth BH]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
XA [auth BI]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
YA [auth BJ]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
ZA [auth BK]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
BB [auth BM]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
CB [auth BN]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
DB [auth BO]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
FB [auth BQ]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
GB [auth BR]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
IB [auth BT]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
JB [auth BU]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
KB [auth BV]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
NB [auth BY]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
OB [auth BZ]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 2]5S rRNA---
B [auth 3]Putative signal-transduction protein with CBS domains- - -
C [auth 1]23S rRNA---
D [auth 4]16S rRNA---
E [auth AA]Large ribosomal subunit protein uL2
F [auth AB]Large ribosomal subunit protein uL3
G [auth AC]Large ribosomal subunit protein uL4
H [auth AD]Large ribosomal subunit protein uL5
I [auth AE]Large ribosomal subunit protein uL6
J [auth AF]Large ribosomal subunit protein eL8
K [auth AG]Large ribosomal subunit protein uL13
L [auth AH]Large ribosomal subunit protein eL13
M [auth AI]Large ribosomal subunit protein uL14
N [auth AJ],
O [auth AK]
Large ribosomal subunit protein eL14
P [auth AL]Large ribosomal subunit protein uL15
Q [auth AM]50S ribosomal protein L15e
R [auth AN]Large ribosomal subunit protein uL16
S [auth AO]Large ribosomal subunit protein uL18
T [auth AP]Large ribosomal subunit protein eL18
U [auth AQ]Large ribosomal subunit protein eL19
V [auth AR]Large ribosomal subunit protein eL20
W [auth AS]Large ribosomal subunit protein eL21
X [auth AT]Large ribosomal subunit protein uL22
Y [auth AU]Large ribosomal subunit protein uL23
Z [auth AV]Large ribosomal subunit protein uL24
AA [auth AW]Large ribosomal subunit protein eL24
BA [auth AX]Large ribosomal subunit protein uL29
CA [auth AY]Large ribosomal subunit protein uL30
DA [auth AZ]Large ribosomal subunit protein eL30
EA [auth Aa]Large ribosomal subunit protein eL31
FA [auth Ab]Large ribosomal subunit protein eL32
GA [auth Ac]Large ribosomal subunit protein eL34
HA [auth Ad]Large ribosomal subunit protein eL37
IA [auth Ae]LSU ribosomal protein L38E
JA [auth Af]Large ribosomal subunit protein eL39
KA [auth Ag]Large ribosomal subunit protein eL40
LA [auth Ah]eL42
MA [auth Ai]Large ribosomal subunit protein eL43
NA [auth Aj]DJ-1/PfpI domain-containing protein- - -
OA [auth Ak]PaREP1 domain containing protein- - -
PA [auth BA]Small ribosomal subunit protein eS1
QA [auth BB]Small ribosomal subunit protein uS2
RA [auth BC]Small ribosomal subunit protein uS3
SA [auth BD]Small ribosomal subunit protein uS4
TA [auth BE]Small ribosomal subunit protein eS4
UA [auth BF]Small ribosomal subunit protein uS5
VA [auth BG]Small ribosomal subunit protein eS6
WA [auth BH]Small ribosomal subunit protein uS7
XA [auth BI]Small ribosomal subunit protein uS8
YA [auth BJ]Small ribosomal subunit protein eS8
ZA [auth BK]Small ribosomal subunit protein uS9
BB [auth BM]Small ribosomal subunit protein uS11
CB [auth BN]Small ribosomal subunit protein uS12
DB [auth BO]Small ribosomal subunit protein uS13
EB [auth BP]Small ribosomal subunit protein uS14
FB [auth BQ]Small ribosomal subunit protein uS15
GB [auth BR]Small ribosomal subunit protein uS17
HB [auth BS]Small ribosomal subunit protein eS17
IB [auth BT]Small ribosomal subunit protein uS19
JB [auth BU]Small ribosomal subunit protein eS19
KB [auth BV]Small ribosomal subunit protein eS24
LB [auth BW]SSU ribosomal protein S25E- -
MB [auth BX]SSU ribosomal protein S26E
NB [auth BY]Small ribosomal subunit protein eS27
OB [auth BZ]Small ribosomal subunit protein eS28
PB [auth Ba]SSU ribosomal protein S30E
QB [auth Bb]aS35---
RB [auth Bc]Small zinc finger protein HVO-2753-like zinc-binding pocket domain-containing protein- - -
AB [auth BL]Small ribosomal subunit protein uS10

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth 3]IPR051462CBS domain-containing proteinFamily
B [auth 3]IPR046342CBS domain superfamilyHomologous Superfamily
B [auth 3]IPR000644CBS domainDomain
E [auth AA]IPR023672Large ribosomal subunit protein uL2, archaeal-typeFamily
E [auth AA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
E [auth AA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth AA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
E [auth AA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
E [auth AA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
E [auth AA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
E [auth AA]IPR002171Large ribosomal subunit protein uL2Family
F [auth AB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
F [auth AB]IPR019928Large ribosomal subunit protein uL3, archaealFamily
F [auth AB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
F [auth AB]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
F [auth AB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
F [auth AB]IPR000597Large ribosomal subunit protein uL3Family
G [auth AC]IPR019970Large ribosomal subunit protein uL4, archaeaFamily
G [auth AC]IPR002136Large ribosomal subunit protein uL4Family
G [auth AC]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
G [auth AC]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
G [auth AC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
H [auth AD]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
H [auth AD]IPR022804Large ribosomal subunit protein uL5, archaealFamily
H [auth AD]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
H [auth AD]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
H [auth AD]IPR002132Large ribosomal subunit protein uL5Family
I [auth AE]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
I [auth AE]IPR019907Large ribosomal subunit protein uL6, archaeaFamily
I [auth AE]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
I [auth AE]IPR000702Large ribosomal subunit protein uL6-likeFamily
J [auth AF]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
J [auth AF]IPR022481Large ribosomal subunit protein eL8, archaeaFamily
J [auth AF]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
J [auth AF]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth AF]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
K [auth AG]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
K [auth AG]IPR005822Large ribosomal subunit protein uL13Family
K [auth AG]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
K [auth AG]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
L [auth AH]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
L [auth AH]IPR001380Large ribosomal subunit protein eL13Family
L [auth AH]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
M [auth AI]IPR019971Large ribosomal subunit protein uL14, archaealFamily
M [auth AI]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
M [auth AI]IPR000218Large ribosomal subunit protein uL14Family
M [auth AI]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
N [auth AJ],
O [auth AK]
IPR023651Large ribosomal subunit protein eL14, archaealFamily
N [auth AJ],
O [auth AK]
IPR039660Large ribosomal subunit protein eL14Family
N [auth AJ],
O [auth AK]
IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
N [auth AJ],
O [auth AK]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
N [auth AJ],
O [auth AK]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
P [auth AL]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
P [auth AL]IPR021131Large ribosomal subunit protein uL15/eL18Domain
P [auth AL]IPR030878Large ribosomal subunit protein uL15Family
P [auth AL]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
P [auth AL]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Q [auth AM]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Q [auth AM]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
Q [auth AM]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
Q [auth AM]IPR000439Large ribosomal subunit protein eL15Family
R [auth AN]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
R [auth AN]IPR022981Large ribosomal subunit protein uL16, archaeaFamily
R [auth AN]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
R [auth AN]IPR016180Large ribosomal subunit protein uL16 domainDomain
R [auth AN]IPR047873Large ribosomal subunit protein uL16Family
R [auth AN]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
S [auth AO]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
T [auth AP]IPR022947Large ribosomal subunit protein eL18, archaeaFamily
T [auth AP]IPR021131Large ribosomal subunit protein uL15/eL18Domain
T [auth AP]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
T [auth AP]IPR000039Large ribosomal subunit protein eL18Family
T [auth AP]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
U [auth AQ]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
U [auth AQ]IPR039547Large ribosomal subunit protein eL19Family
U [auth AQ]IPR033936Large ribosomal subunit protein eL19, archaealDomain
U [auth AQ]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
U [auth AQ]IPR000196Large ribosomal subunit protein eL19 domainDomain
V [auth AR]IPR028877Large ribosomal subunit protein eL20Family
V [auth AR]IPR023573Large ribosomal subunit protein eL20 domainDomain
W [auth AS]IPR022856Large ribosomal subunit protein eL21, archaealFamily
W [auth AS]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
W [auth AS]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
W [auth AS]IPR001147Large ribosomal subunit protein eL21Family
W [auth AS]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
X [auth AT]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
X [auth AT]IPR001063Large ribosomal subunit protein uL22Family
X [auth AT]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
Y [auth AU]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Y [auth AU]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
Y [auth AU]IPR019985Large ribosomal subunit protein uL23Family
Y [auth AU]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
Y [auth AU]IPR013025Large ribosomal subunit protein uL23-likeFamily
Z [auth AV]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
Z [auth AV]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
Z [auth AV]IPR005824KOWDomain
Z [auth AV]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Z [auth AV]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
Z [auth AV]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
AA [auth AW]IPR023438Ribosomal_eL24Unknown
AA [auth AW]IPR011017TRASH domainDomain
AA [auth AW]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
AA [auth AW]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
AA [auth AW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
BA [auth AX]IPR050063Universal ribosomal protein uL29Family
BA [auth AX]IPR001854Large ribosomal subunit protein uL29Family
BA [auth AX]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
CA [auth AY]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
CA [auth AY]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
CA [auth AY]IPR039699Large ribosomal subunit protein uL30Family
CA [auth AY]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
CA [auth AY]IPR005997Large ribosomal subunit protein uL30, archaealFamily
DA [auth AZ]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
DA [auth AZ]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
DA [auth AZ]IPR000231Large ribosomal subunit protein eL30Family
DA [auth AZ]IPR039109Large ribosomal subunit protein eL30-likeFamily
DA [auth AZ]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
EA [auth Aa]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
EA [auth Aa]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
EA [auth Aa]IPR000054Large ribosomal subunit protein eL31Family
FA [auth Ab]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
FA [auth Ab]IPR023654Large ribosomal subunit protein eL32, archaealFamily
FA [auth Ab]IPR001515Large ribosomal subunit protein eL32Family
GA [auth Ac]IPR008195Large ribosomal subunit protein eL34Family
GA [auth Ac]IPR047868Large ribosomal subunit protein eL34, archaeal-typeFamily
GA [auth Ac]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
HA [auth Ad]IPR001569Large ribosomal subunit protein eL37Family
HA [auth Ad]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
HA [auth Ad]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HA [auth Ad]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
IA [auth Ae]IPR002675Large ribosomal subunit protein eL38Family
IA [auth Ae]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
JA [auth Af]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
JA [auth Af]IPR000077Large ribosomal subunit protein eL39Family
JA [auth Af]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
KA [auth Ag]IPR001975Large ribosomal subunit protein eL40 domainDomain
KA [auth Ag]IPR023657Large ribosomal subunit protein eL40, archaealFamily
KA [auth Ag]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
KA [auth Ag]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
LA [auth Ah]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
LA [auth Ah]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
LA [auth Ah]IPR000552Large ribosomal subunit protein eL42Family
MA [auth Ai]IPR002674Large ribosomal subunit protein eL43Family
MA [auth Ai]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
MA [auth Ai]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
MA [auth Ai]IPR050522Eukaryotic ribosomal protein eL43Family
NA [auth Aj]IPR029062Class I glutamine amidotransferase-likeHomologous Superfamily
NA [auth Aj]IPR002818DJ-1/PfpIDomain
PA [auth BA]IPR001593Small ribosomal subunit protein eS1Family
PA [auth BA]IPR030838Small ribosomal subunit protein eS1, archaealFamily
QA [auth BB]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
QA [auth BB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
QA [auth BB]IPR001865Small ribosomal subunit protein uS2Family
QA [auth BB]IPR023454Small ribosomal subunit protein uS2, archaealFamily
RA [auth BC]IPR004087K Homology domainDomain
RA [auth BC]IPR004044K Homology domain, type 2Domain
RA [auth BC]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
RA [auth BC]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
RA [auth BC]IPR027488Small ribosomal subunit protein uS3, archaealFamily
RA [auth BC]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
RA [auth BC]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
RA [auth BC]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
SA [auth BD]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
SA [auth BD]IPR002942RNA-binding S4 domainDomain
SA [auth BD]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
SA [auth BD]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
SA [auth BD]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
SA [auth BD]IPR022801Small ribosomal subunit protein uS4Family
SA [auth BD]IPR022802Small ribosomal subunit protein uS4, archaealFamily
TA [auth BE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
TA [auth BE]IPR002942RNA-binding S4 domainDomain
TA [auth BE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
TA [auth BE]IPR000876Small ribosomal subunit protein eS4Family
TA [auth BE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
TA [auth BE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
TA [auth BE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
UA [auth BF]IPR000851Small ribosomal subunit protein uS5Family
UA [auth BF]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
UA [auth BF]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
UA [auth BF]IPR047866Small ribosomal subunit protein uS5, archaeaFamily
UA [auth BF]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
UA [auth BF]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
UA [auth BF]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
UA [auth BF]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
VA [auth BG]IPR001377Small ribosomal subunit protein eS6Family
VA [auth BG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
VA [auth BG]IPR020924Small ribosomal subunit protein eS6, archaealFamily
WA [auth BH]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
WA [auth BH]IPR000235Small ribosomal subunit protein uS7Family
WA [auth BH]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
WA [auth BH]IPR026018Small ribosomal subunit protein uS7, archaealFamily
WA [auth BH]IPR023798Small ribosomal subunit protein uS7 domainDomain
WA [auth BH]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
XA [auth BI]IPR000630Small ribosomal subunit protein uS8Family
XA [auth BI]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
XA [auth BI]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
YA [auth BJ]IPR001047Small ribosomal subunit protein eS8Family
YA [auth BJ]IPR020919Small ribosomal subunit protein eS8, archaealFamily
YA [auth BJ]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
ZA [auth BK]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
ZA [auth BK]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
ZA [auth BK]IPR019958Small ribosomal subunit protein uS9, archaealFamily
ZA [auth BK]IPR000754Small ribosomal subunit protein uS9Family
ZA [auth BK]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
BB [auth BM]IPR019961Small ribosomal subunit protein uS11, archaealFamily
BB [auth BM]IPR001971Small ribosomal subunit protein uS11Family
BB [auth BM]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
BB [auth BM]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
CB [auth BN]IPR006032Small ribosomal subunit protein uS12Family
CB [auth BN]IPR022863Ribosomal protein uS12, archaeaFamily
CB [auth BN]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
CB [auth BN]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
DB [auth BO]IPR019977Small ribosomal subunit protein uS13, archaealFamily
DB [auth BO]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
DB [auth BO]IPR001892Small ribosomal subunit protein uS13Family
DB [auth BO]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
DB [auth BO]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
EB [auth BP]IPR001209Small ribosomal subunit protein uS14Family
EB [auth BP]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
EB [auth BP]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
EB [auth BP]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
EB [auth BP]IPR023676Small ribosomal subunit protein uS14, archaeaFamily
FB [auth BQ]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
FB [auth BQ]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
FB [auth BQ]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
FB [auth BQ]IPR000589Small ribosomal subunit protein uS15Family
GB [auth BR]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
GB [auth BR]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
GB [auth BR]IPR000266Small ribosomal subunit protein uS17Family
GB [auth BR]IPR019978Small ribosomal subunit protein uS17, archaealFamily
GB [auth BR]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
HB [auth BS]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
HB [auth BS]IPR001210Small ribosomal subunit protein eS17Family
HB [auth BS]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
IB [auth BT]IPR002222Small ribosomal subunit protein uS19Family
IB [auth BT]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
IB [auth BT]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
IB [auth BT]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
JB [auth BU]IPR027548Small ribosomal subunit protein eS19, archaealFamily
JB [auth BU]IPR001266Small ribosomal subunit protein eS19Family
JB [auth BU]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
JB [auth BU]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
JB [auth BU]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
KB [auth BV]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
KB [auth BV]IPR001976Small ribosomal subunit protein eS24Family
KB [auth BV]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
LB [auth BW]IPR004977Small ribosomal subunit protein eS25Family
MB [auth BX]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
MB [auth BX]IPR000892Small ribosomal subunit protein eS26Family
NB [auth BY]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
NB [auth BY]IPR000592Small ribosomal subunit protein eS27Family
NB [auth BY]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
OB [auth BZ]IPR028626Ribosomal protein eS28 conserved siteConserved Site
OB [auth BZ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
OB [auth BZ]IPR000289Small ribosomal subunit protein eS28Family
PB [auth Ba]IPR006846Small ribosomal subunit protein eS30Family
RB [auth Bc]IPR011668Small zinc finger protein HVO_2753-like, zinc-binding pocketDomain
RB [auth Bc]IPR044720Zinc finger protein HVO_2753-likeFamily
AB [auth BL]IPR001848Small ribosomal subunit protein uS10Family
AB [auth BL]IPR027486Small ribosomal subunit protein uS10 domainDomain
AB [auth BL]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
AB [auth BL]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
AB [auth BL]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site