Solution structures of ferrocytochrome c3 from Desulfovibrio vulgaris Miyazaki F
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D_15N-separated_NOESY | U-15N cytochrome c3 in the fully reduced state; 30mM sodium phosphate buffer | 100% D2O | 56mM | 7.0 | 303 | ||
| 2 | 2D NOESY | Cytochrome c3 in the fully reduced state; 30mM sodium phosphate buffer | 10% D2O, 90% H2O | 56mM | 7.0 | 303 | ||
| 3 | DQF-COSY | Cytochrome c3 in the fully reduced state; 30mM sodium phosphate buffer | 10% D2O, 90% H2O | 56mM | 7.0 | 303 | ||
| 4 | E-COSY | Cytochrome c3 in the fully reduced state; 30mM sodium phosphate buffer | 10% D2O, 90% H2O | 56mM | 7.0 | 303 | ||
| 5 | 2D NOESY | 56mM | 7.0 | 303 | ||||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX | 600 |
| 2 | Bruker | AMX | 500 |
| 3 | Bruker | DRX | 400 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | X-PLOR | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the least restraint violations |
| Conformers Calculated Total Number | 300 |
| Conformers Submitted Total Number | 20 |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | structure solution | X-PLOR | 3.8.5.1 | Brunger, A.T. |
| 2 | refinement | X-PLOR | 3.8.5.1 | Brunger, A.T. |
