7N6F

Co-complex CYP46A1 with compound 3f

X-RAY DIFFRACTION

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Starting Model(s)

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	7LRL

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP		290	0.4M CaCl2, 10-20% PEG3350

Crystal Properties
Matthews coefficient	Solvent content
2.28	41.2

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 57.943	α = 90
b = 63.585	β = 90
c = 123.633	γ = 90

Symmetry
Space Group	P 21 21 21

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	CCD	ADSC QUANTUM 315r		2015-01-16	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	ALS BEAMLINE 5.0.3	0.976	ALS	5.0.3

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Sym I (Observed)	Rpim I (All)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.4	50	90.42	0.048	0.02	31.95	6.4		81954

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R-Sym I (Observed)	Rpim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.4	1.42	55.3		0.521	0.227	0.869	2.8

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	7LRL	1.4	30.81	81954	4097	90.42	0.161	0.1597	0.1847	19.303

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.014			0.004		0.01

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	31.817
r_dihedral_angle_4_deg	17.219
r_dihedral_angle_3_deg	13.974
r_lrange_it	5.803
r_lrange_other	5.803
r_dihedral_angle_1_deg	5.781
r_scangle_it	4.523
r_scangle_other	4.522
r_scbond_it	2.947
r_scbond_other	2.947
r_mcangle_other	2.527
r_mcangle_it	2.525
r_angle_refined_deg	1.903
r_mcbond_it	1.75
r_mcbond_other	1.736
r_angle_other_deg	1.526
r_nbd_refined	0.234
r_nbd_other	0.21
r_symmetry_nbd_refined	0.201
r_xyhbond_nbd_refined	0.194
r_symmetry_nbd_other	0.189
r_symmetry_xyhbond_nbd_other	0.178
r_nbtor_refined	0.177
r_symmetry_xyhbond_nbd_refined	0.123
r_chiral_restr	0.104
r_symmetry_nbtor_other	0.087
r_bond_refined_d	0.013
r_gen_planes_refined	0.011
r_gen_planes_other	0.007
r_bond_other_d	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	3511
Nucleic Acid Atoms
Solvent Atoms	312
Heterogen Atoms	109

Software

Software
Software Name	Purpose
REFMAC	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHASER	phasing