CDP: CYTIDINE-5'-DIPHOSPHATE
CDP is a Ligand Of Interest in 1GX1 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1GX1_CDP_B_1157 | 62% | 38% | 0.116 | 0.908 | 1.24 | 1.21 | 3 | 2 | 0 | 0 | 100% | 1 |
| 1GX1_CDP_A_1158 | 50% | 38% | 0.132 | 0.883 | 0.9 | 1.51 | 1 | 6 | 0 | 0 | 100% | 1 |
| 1GX1_CDP_B_1160 | 37% | 34% | 0.144 | 0.841 | 1.11 | 1.49 | 2 | 5 | 0 | 0 | 100% | 1 |
| 1U3L_CDP_A_669 | 86% | 22% | 0.101 | 0.97 | 1.49 | 1.75 | 4 | 6 | 1 | 0 | 100% | 1 |
| 1YQN_CDP_A_200 | 78% | 40% | 0.118 | 0.96 | 0.94 | 1.38 | - | 4 | 0 | 0 | 100% | 1 |
| 6SDK_CDP_C_301 | 100% | 5% | 0.043 | 0.987 | 3.72 | 1.58 | 12 | 6 | 0 | 0 | 100% | 1 |
| 3BOS_CDP_B_300 | 100% | 55% | 0.046 | 0.988 | 0.92 | 0.81 | 1 | 1 | 0 | 0 | 100% | 1 |
| 8VHP_CDP_D_809 | 98% | 52% | 0.051 | 0.975 | 0.89 | 0.96 | - | 2 | 2 | 0 | 100% | 1 |
| 2VBU_CDP_A_1133 | 96% | 45% | 0.078 | 0.989 | 0.89 | 1.22 | - | 3 | 0 | 0 | 100% | 1 |
| 1ORR_CDP_B_1301 | 96% | 34% | 0.06 | 0.97 | 1.28 | 1.32 | 3 | 6 | 0 | 0 | 100% | 1 |
