GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 2PHN designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2PHN_GDP_A_2696 | 100% | 45% | 0.046 | 0.99 | 1.08 | 1.08 | 1 | 2 | 0 | 0 | 100% | 1 |
2PHN_GDP_B_2697 | 99% | 47% | 0.046 | 0.982 | 0.98 | 1.1 | 2 | 2 | 0 | 0 | 100% | 1 |
1RRG_GDP_A_183 | 100% | 10% | 0.036 | 0.997 | 1.96 | 2.53 | 6 | 8 | 0 | 0 | 100% | 1 |
5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
8CNJ_GDP_B_201 | 100% | 56% | 0.04 | 0.992 | 0.91 | 0.77 | 1 | - | 0 | 0 | 100% | 1 |
5UQW_GDP_A_1002 | 100% | 23% | 0.04 | 0.99 | 1.16 | 2.16 | 1 | 3 | 0 | 0 | 100% | 1 |
6TAN_GDP_A_201 | 100% | 29% | 0.046 | 0.99 | 0.87 | 2.09 | - | 4 | 0 | 0 | 100% | 1 |