Ligand validation:3DX4

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 3DX4 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3DX4_NAG_A_1046	2%	32%	0.299	0.533	0.49	2.18	-	4	0	1	100%	0.9333
3DDF_NAG_A_2001	19%	19%	0.269	0.867	0.81	2.62	-	8	4	0	100%	0.9333
1HWW_NAG_A_1101	13%	70%	0.258	0.799	0.48	0.68	-	1	0	0	100%	0.9333
3D4Y_NAG_A_1046	13%	57%	0.153	0.687	0.42	1.2	-	2	0	0	100%	0.9333
1TQU_NAG_A_1046	11%	48%	0.281	0.802	0.99	1.01	1	1	2	1	100%	0.9333
3D50_NAG_A_1046	10%	33%	0.126	0.626	0.76	1.86	-	3	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3PPS_NAG_B_760	100%	44%	0.028	0.993	0.57	1.57	-	3	0	0	100%	0.9333
5O59_NAG_A_601	100%	70%	0.024	0.993	0.3	0.85	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.