UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 4IRQ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4IRQ_UDP_A_402 | 89% | 33% | 0.102 | 0.982 | 0.95 | 1.66 | 1 | 5 | 1 | 0 | 100% | 1 |
4IRQ_UDP_C_402 | 86% | 34% | 0.118 | 0.986 | 0.98 | 1.6 | 1 | 5 | 0 | 0 | 100% | 1 |
4IRQ_UDP_B_402 | 77% | 35% | 0.145 | 0.984 | 0.94 | 1.62 | 1 | 7 | 0 | 0 | 100% | 1 |
4IRQ_UDP_D_402 | 76% | 38% | 0.149 | 0.985 | 0.97 | 1.43 | 1 | 5 | 0 | 0 | 100% | 1 |
4IRP_UDP_B_401 | 3% | 39% | 0.439 | 0.796 | 0.93 | 1.44 | 1 | 4 | 0 | 0 | 100% | 1 |
8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
4PHR_UDP_A_301 | 100% | 42% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
2B69_UDP_A_900 | 100% | 42% | 0.046 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
1GX4_UDP_A_401 | 100% | 32% | 0.046 | 0.991 | 1.68 | 1.03 | 2 | 3 | 0 | 0 | 100% | 1 |
3U2V_UDP_B_270 | 99% | 33% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |