Ligand validation:4PY8

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 4PY8 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4PY8_NAG_A_404	31%	44%	0.195	0.863	0.69	1.47	-	2	0	0	100%	0.9333
4PY8_NAG_A_401	22%	46%	0.234	0.848	0.67	1.38	-	2	0	0	100%	0.9333
2WRG_NAG_J_1328	73%	24%	0.091	0.918	0.64	2.44	-	6	3	0	100%	1
3GBN_NAG_A_330	37%	45%	0.206	0.904	0.72	1.4	1	1	1	0	100%	0.9333
3R2X_NAG_A_501	28%	28%	0.172	0.824	0.77	2.08	1	4	0	0	100%	0.9333
4GXU_NAG_G_401	22%	63%	0.188	0.806	0.66	0.77	-	-	0	0	100%	0.9333
3HTO_NAG_A_633	14%	61%	0.279	0.831	0.74	0.76	-	-	0	0	100%	0.9333
3PPS_NAG_B_760	100%	44%	0.028	0.993	0.57	1.57	-	3	0	0	100%	0.9333
4AKM_NAG_A_1379	100%	67%	0.029	0.994	0.54	0.73	-	-	0	0	100%	0.9333
3CQL_NAG_B_244	100%	68%	0.029	0.987	0.42	0.8	-	-	0	0	100%	1
3RIK_NAG_D_509	100%	8%	0.035	0.991	2.03	2.54	4	7	2	0	100%	0.9333
5VEM_NAG_B_509	100%	74%	0.003	0.957	0.46	0.56	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.