4WPO | pdb_00004wpo


GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 4WPO designated by the RCSB
Help


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4WPO_GDP_DZ_702Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4WPO_GDP_DZ_702Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4WPO_GDP_DZ_702Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4WPO_GDP_DZ_702 89% 45% 0.073 0.9511.02 1.11 1 270100%0.99
4WPO_GDP_BZ_702 87% 37% 0.079 0.9491 1.46 - 560100%0.99
4WQF_GDP_BZ_704 96% 36% 0.059 0.9671.01 1.49 1 750100%0.98
4WQY_GDP_BZ_801 93% 45% 0.07 0.9630.91 1.22 - 240100%0.99
4WQU_GDP_BZ_702 91% 41% 0.068 0.9550.95 1.33 - 450100%0.99
4V8U_GDP_CY_702 87% 28% 0.069 0.9411.35 1.55 3 7100100%1
1FNM_GDP_A_900 80% 19% 0.129 0.9771.29 2.16 3 710100%1
1TVK_GDP_B_1500 100% 23% 0.012 0.9992.28 0.95 3 280100%1
8QEG_GDP_A_401 100% 51% 0.031 0.9931.02 0.87 3 100100%1
8QEH_GDP_A_405 100% 55% 0.03 0.9930.89 0.85 1 100100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1
2CXX_GDP_B_2401 100% 29% 0.031 0.9891.26 1.57 1 300100%1