Ligand validation:4YDH

GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER

GNP is a Ligand Of Interest in 4YDH designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4YDH_GNP_B_201	36%	12%	0.218	0.914	1.85	2.26	11	13	6	0	100%	1
4YDH_GNP_D_201	24%	13%	0.254	0.883	2.04	1.91	11	10	4	0	100%	1
4JS0_GNP_A_201	96%	16%	0.081	0.988	1.46	2.18	5	7	0	0	100%	1
1NF3_GNP_A_200	88%	7%	0.1	0.975	2.42	2.38	11	9	0	0	100%	1
4YC7_GNP_A_201	81%	9%	0.122	0.974	2.29	2.24	11	12	3	0	100%	1
3EG5_GNP_C_179	67%	12%	0.169	0.979	1.63	2.42	6	8	2	0	100%	1
5UPK_GNP_C_200	64%	8%	0.146	0.944	2.56	2.01	7	9	0	0	100%	1
8YIM_GNP_A_201	100%	19%	0.028	0.994	1.37	2.06	5	6	0	0	100%	1
4HAU_GNP_A_301	100%	19%	0.029	0.992	1.42	2.01	3	7	1	0	100%	1
4BRG_GNP_B_1397	100%	7%	0.036	0.994	2.14	2.73	10	16	3	0	100%	1
6BVK_GNP_A_201	100%	14%	0.034	0.992	1.75	2.13	6	7	0	0	100%	1
4HAZ_GNP_A_301	100%	17%	0.032	0.988	1.55	2.02	4	8	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.