1RY: [[(2R,5S)-5-(4-azanyl-5-fluoranyl-2-oxidanylidene-pyrimidin-1-yl)-1,3-oxathiolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
1RY is a Ligand Of Interest in 5C52 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5C52_1RY_A_1301 | 13% | 2% | 0.357 | 0.896 | 3.77 | 3.38 | 10 | 16 | 1 | 1 | 100% | 1 |
| 5C51_1RY_A_4003 | 50% | 5% | 0.109 | 0.857 | 3.58 | 1.68 | 9 | 6 | 13 | 0 | 100% | 1 |
| 4K4I_1RY_E_601 | 90% | 17% | 0.098 | 0.98 | 2.19 | 1.42 | 6 | 5 | 0 | 0 | 100% | 1 |
| 5TB9_1RY_A_401 | 89% | 25% | 0.097 | 0.975 | 1.49 | 1.56 | 3 | 4 | 1 | 0 | 100% | 1 |
| 5U2T_1RY_A_401 | 81% | 22% | 0.103 | 0.955 | 1.8 | 1.43 | 4 | 4 | 1 | 0 | 100% | 1 |
| 6UIR_1RY_A_601 | 77% | 16% | 0.12 | 0.96 | 2.12 | 1.59 | 8 | 7 | 0 | 0 | 100% | 1 |
| 6UJX_1RY_A_604 | 65% | 16% | 0.153 | 0.955 | 2.05 | 1.67 | 8 | 6 | 1 | 0 | 100% | 0.45 |
