UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 5CNT designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5CNT_UDP_A_801 | 58% | 31% | 0.181 | 0.96 | 1.11 | 1.64 | 3 | 6 | 2 | 0 | 100% | 1 |
| 5CNT_UDP_B_801 | 33% | 29% | 0.28 | 0.962 | 1.12 | 1.7 | 1 | 6 | 3 | 0 | 100% | 1 |
| 5CNT_UDP_D_801 | 28% | 31% | 0.303 | 0.96 | 1.1 | 1.64 | 2 | 7 | 2 | 0 | 100% | 1 |
| 5CNT_UDP_C_801 | 19% | 31% | 0.335 | 0.933 | 1.08 | 1.64 | 2 | 7 | 3 | 0 | 100% | 1 |
| 8X3Q_UDP_A_401 | 100% | 3% | 0.021 | 0.996 | 3.31 | 2.67 | 13 | 13 | 1 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
| 8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
| 4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
| 2IV7_UDP_A_1372 | 100% | 40% | 0.035 | 0.984 | 0.85 | 1.49 | - | 4 | 0 | 0 | 100% | 1 |
