8DG: 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
8DG is a Ligand Of Interest in 5GG6 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5GG6_8DG_A_401 | 98% | 8% | 0.059 | 0.979 | 2.02 | 2.55 | 6 | 12 | 0 | 0 | 100% | 1 |
5GG6_8DG_B_401 | 94% | 9% | 0.069 | 0.969 | 2.05 | 2.44 | 6 | 12 | 0 | 0 | 100% | 1 |
5GG8_8DG_A_401 | 94% | 6% | 0.079 | 0.978 | 1.97 | 2.97 | 6 | 12 | 1 | 0 | 100% | 1 |
5GG7_8DG_B_401 | 80% | 5% | 0.094 | 0.943 | 2.12 | 3.25 | 7 | 11 | 2 | 0 | 100% | 1 |
6M6Y_8DG_A_401 | 76% | 46% | 0.102 | 0.937 | 1.03 | 1.06 | 2 | 3 | 0 | 0 | 100% | 0.975 |
7KT3_8DG_A_501 | 98% | 29% | 0.058 | 0.984 | 1.24 | 1.57 | 4 | 5 | 0 | 0 | 100% | 1 |
7KTJ_8DG_A_506 | 98% | 43% | 0.064 | 0.987 | 0.86 | 1.32 | - | 3 | 0 | 0 | 100% | 1 |
7X9H_8DG_A_202 | 93% | 22% | 0.075 | 0.969 | 0.97 | 2.26 | 2 | 13 | 0 | 0 | 100% | 0.7 |
7X9I_8DG_A_202 | 91% | 19% | 0.084 | 0.972 | 0.95 | 2.44 | 3 | 14 | 0 | 0 | 100% | 0.3 |