PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
PGV is a Ligand Of Interest in 5IY5 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5IY5_PGV_C_304 | 77% | 44% | 0.119 | 0.959 | 0.8 | 1.33 | 2 | 7 | 5 | 0 | 100% | 1 |
| 5IY5_PGV_P_304 | 72% | 48% | 0.129 | 0.952 | 0.82 | 1.17 | 2 | 6 | 1 | 0 | 100% | 1 |
| 5IY5_PGV_N_612 | 70% | 46% | 0.154 | 0.974 | 0.85 | 1.21 | 1 | 4 | 1 | 0 | 100% | 1 |
| 5IY5_PGV_A_608 | 70% | 40% | 0.155 | 0.972 | 1.06 | 1.28 | 4 | 6 | 4 | 0 | 100% | 1 |
| 5IY5_PGV_P_305 | 9% | 32% | 0.236 | 0.73 | 1.29 | 1.39 | 2 | 6 | 4 | 0 | 100% | 1 |
| 5IY5_PGV_C_305 | 9% | 29% | 0.245 | 0.737 | 1.4 | 1.42 | 3 | 7 | 9 | 0 | 100% | 1 |
| 5IY5_PGV_A_607 | 8% | 44% | 0.299 | 0.768 | 1.12 | 1.05 | 2 | 5 | 5 | 0 | 100% | 1 |
| 5B1A_PGV_P_303 | 98% | 35% | 0.064 | 0.985 | 1.06 | 1.51 | 3 | 13 | 4 | 0 | 100% | 1 |
| 5X1B_PGV_C_302 | 95% | 52% | 0.078 | 0.981 | 0.92 | 0.93 | 2 | 4 | 0 | 0 | 100% | 1 |
| 5B1B_PGV_C_302 | 94% | 56% | 0.078 | 0.979 | 0.81 | 0.87 | 1 | 1 | 3 | 0 | 100% | 1 |
| 7YPY_PGV_P_302 | 94% | 54% | 0.079 | 0.978 | 0.79 | 0.99 | 2 | 2 | 1 | 0 | 100% | 1 |
| 7COH_PGV_C_267 | 93% | 49% | 0.087 | 0.983 | 0.87 | 1.09 | 3 | 3 | 0 | 0 | 100% | 1 |
| 5ZCQ_PGV_N_608 | 90% | 32% | 0.094 | 0.978 | 1.15 | 1.53 | 5 | 8 | 1 | 0 | 100% | 1 |
