5K9Q
NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 5K9Q designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
5K9Q_NAG_F_201 | 94% | 88% | 0.076 | 0.974 | 0.2 | 0.47 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_E_405 | 81% | 87% | 0.1 | 0.953 | 0.23 | 0.45 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_B_201 | 70% | 89% | 0.122 | 0.938 | 0.27 | 0.36 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_O_405 | 68% | 89% | 0.131 | 0.941 | 0.28 | 0.37 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_A_405 | 62% | 91% | 0.128 | 0.921 | 0.23 | 0.33 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_M_402 | 62% | 77% | 0.125 | 0.915 | 0.42 | 0.51 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_D_201 | 60% | 91% | 0.155 | 0.941 | 0.19 | 0.39 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_O_403 | 60% | 86% | 0.175 | 0.96 | 0.2 | 0.52 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_E_403 | 54% | 90% | 0.184 | 0.948 | 0.18 | 0.41 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_M_405 | 51% | 88% | 0.177 | 0.932 | 0.23 | 0.43 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_Q_405 | 51% | 90% | 0.19 | 0.945 | 0.2 | 0.39 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_C_405 | 51% | 91% | 0.175 | 0.929 | 0.21 | 0.35 | - | - | 1 | 0 | 100% | 0.9333 |
5K9Q_NAG_C_402 | 50% | 78% | 0.171 | 0.921 | 0.4 | 0.49 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_N_201 | 49% | 90% | 0.169 | 0.916 | 0.2 | 0.41 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_E_402 | 46% | 88% | 0.179 | 0.915 | 0.3 | 0.36 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_R_201 | 46% | 87% | 0.18 | 0.914 | 0.17 | 0.51 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_E_404 | 43% | 87% | 0.173 | 0.897 | 0.33 | 0.36 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_O_402 | 36% | 80% | 0.169 | 0.862 | 0.38 | 0.45 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_Q_402 | 36% | 81% | 0.177 | 0.87 | 0.34 | 0.48 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_O_404 | 30% | 90% | 0.182 | 0.845 | 0.26 | 0.35 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_A_402 | 28% | 86% | 0.234 | 0.888 | 0.33 | 0.39 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_P_201 | 26% | 87% | 0.231 | 0.873 | 0.23 | 0.45 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_M_404 | 22% | 90% | 0.208 | 0.822 | 0.27 | 0.35 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_Q_403 | 21% | 91% | 0.255 | 0.866 | 0.17 | 0.4 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_M_403 | 21% | 43% | 0.227 | 0.833 | 0.98 | 1.24 | 1 | 1 | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_Q_404 | 19% | 87% | 0.243 | 0.84 | 0.29 | 0.4 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_A_403 | 17% | 87% | 0.277 | 0.861 | 0.23 | 0.45 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_C_404 | 12% | 90% | 0.343 | 0.876 | 0.25 | 0.37 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_A_404 | 10% | 70% | 0.238 | 0.737 | 0.45 | 0.68 | - | 1 | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_C_403 | 8% | 40% | 0.265 | 0.734 | 1.19 | 1.15 | 1 | 3 | 1 | 0 | 100% | 0.9333 |
5K9Q_NAG_M_401 | 1% | 74% | 0.574 | 0.749 | 0.48 | 0.52 | - | - | 1 | 0 | 100% | 0.9333 |
5K9Q_NAG_Q_401 | 1% | 88% | 0.59 | 0.74 | 0.32 | 0.34 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_E_401 | 1% | 75% | 0.453 | 0.529 | 0.38 | 0.59 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_A_401 | 0% | 78% | 0.609 | 0.611 | 0.19 | 0.69 | - | 1 | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_O_401 | 0% | 87% | 0.652 | 0.592 | 0.26 | 0.42 | - | - | 0 | 0 | 100% | 0.9333 |
5K9Q_NAG_C_401 | 0% | 77% | 0.718 | 0.429 | 0.41 | 0.51 | - | - | 0 | 0 | 100% | 0.9333 |
8TJ6_NAG_E_401 | 70% | 85% | 0.114 | 0.931 | 0.32 | 0.41 | - | - | 0 | 0 | 100% | 0.9333 |
4O58_NAG_A_503 | 68% | 33% | 0.148 | 0.96 | 0.57 | 2.02 | - | 3 | 0 | 0 | 100% | 0.9333 |
1HGE_NAG_A_334 | 68% | 50% | 0.095 | 0.905 | 0.76 | 1.17 | - | 2 | 0 | 0 | 100% | 0.9333 |
5KAN_NAG_C_401 | 62% | 86% | 0.131 | 0.922 | 0.2 | 0.5 | - | - | 0 | 0 | 100% | 0.9333 |
6BKM_NAG_E_506 | 60% | 48% | 0.131 | 0.916 | 0.63 | 1.34 | - | 1 | 0 | 0 | 100% | 0.9333 |
3PPS_NAG_B_760 | 100% | 44% | 0.028 | 0.993 | 0.57 | 1.57 | - | 3 | 0 | 0 | 100% | 0.9333 |
4AKM_NAG_A_1379 | 100% | 67% | 0.029 | 0.994 | 0.54 | 0.73 | - | - | 0 | 0 | 100% | 0.9333 |
3CQL_NAG_B_244 | 100% | 68% | 0.029 | 0.987 | 0.42 | 0.8 | - | - | 0 | 0 | 100% | 1 |
3RIK_NAG_D_509 | 100% | 8% | 0.035 | 0.991 | 2.03 | 2.54 | 4 | 7 | 2 | 0 | 100% | 0.9333 |
5VEM_NAG_B_509 | 100% | 74% | 0.003 | 0.957 | 0.46 | 0.56 | - | - | 0 | 0 | 100% | 0.9333 |