Ligand validation:5LHD

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5LHD designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5LHD_NAG_C_1117	8%	67%	0.175	0.653	0.53	0.74	-	-	0	1	100%	0.9333
5LHD_NAG_A_1015	7%	70%	0.153	0.602	0.54	0.63	-	-	0	1	100%	0.9333
5LHD_NAG_A_1022	5%	68%	0.145	0.557	0.48	0.76	-	-	0	0	100%	0.9333
5LHD_NAG_D_1016	5%	67%	0.167	0.565	0.48	0.78	-	-	0	0	100%	0.9333
5LHD_NAG_B_1021	4%	61%	0.168	0.529	0.56	0.91	-	-	0	0	100%	0.9333
5LHD_NAG_D_1025	2%	69%	0.154	0.446	0.54	0.66	-	-	0	0	100%	0.9333
6U7E_NAG_A_5002	76%	61%	0.134	0.971	0.55	0.92	-	1	0	0	100%	0.9333
6U7F_NAG_B_5006	75%	69%	0.128	0.96	0.46	0.73	-	-	0	0	100%	0.9333
4FYR_NAG_A_1001	71%	59%	0.089	0.909	0.53	1.02	-	-	0	0	100%	0.9333
4FYS_NAG_A_1009	71%	33%	0.09	0.908	0.53	2.09	-	5	0	0	100%	0.9333
4FYQ_NAG_A_1009	63%	54%	0.103	0.896	0.5	1.25	-	2	0	0	100%	0.9333
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3GXM_NAG_A_498	100%	45%	0.026	0.992	0.75	1.34	-	2	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.