8YL: (2S,3R)-2-[(2S,3R)-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfan yl-3-methyl-2,3-dihydro-1H-pyrrole-5-carboxylic acid

8YL is a Ligand Of Interest in 5YPM designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5YPM_8YL_D_303 57% 17% 0.16 0.9362.18 1.45 3 300100%0.86
5YPM_8YL_F_303 53% 17% 0.153 0.9152.18 1.44 3 400100%0.98
5YPM_8YL_C_303 48% 17% 0.158 0.9012.2 1.44 3 300100%0.88
5YPM_8YL_A_303 48% 18% 0.161 0.9022.19 1.34 3 400100%0.98
5YPM_8YL_E_303 46% 19% 0.176 0.912.2 1.31 3 300100%0.88
5YPM_8YL_G_303 40% 14% 0.169 0.8812.24 1.67 3 610100%0.98
5YPM_8YL_B_303 29% 14% 0.216 0.8752.2 1.66 3 500100%0.92
5YPM_8YL_H_303 11% 17% 0.279 0.7932.22 1.41 3 300100%0.79
5N0H_8YL_A_301 45% 18% 0.18 0.911.41 2.13 6 510100%0.6
7LLB_8YL_A_301 29% 49% 0.198 0.8540.89 1.09 1 200100%1
6ZW2_8YL_A_402 23% 41% 0.19 0.8750.72 1.56 - 10067%16.669999999999998