8E9D | pdb_00008e9d


PLP: PYRIDOXAL-5'-PHOSPHATE

PLP is a Ligand Of Interest in 8E9D designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8E9D_PLP_B_402Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8E9D_PLP_B_402Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8E9D_PLP_B_402Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
8E9D_PLP_B_402 93% 18% 0.085 0.981.79 1.76 2 600100%1
8E9D_PLP_A_402 92% 13% 0.093 0.9861.66 2.26 2 500100%1
8E9O_PLP_B_401 95% 41% 0.089 0.9920.91 1.37 1 300100%1
8E9Q_PLP_B_401 94% 41% 0.089 0.990.96 1.32 1 400100%1
8E9M_PLP_A_401 94% 44% 0.088 0.9880.93 1.24 - 200100%1
8E9U_PLP_B_401 92% 41% 0.097 0.991.16 1.12 2 210100%1
2D64_PLP_A_413 92% 18% 0.087 0.9791.67 1.89 4 400100%1
3CEJ_PLP_A_832 100% 41% 0.021 0.9981.23 1.05 1 280100%1
3CEM_PLP_A_832 100% 41% 0.021 0.9971.24 1.04 2 210100%1
4PPM_PLP_A_902 100% 7% 0.019 0.9982.88 1.91 9 600100%1
1EKV_PLP_A_370 100% 19% 0.019 0.9982 1.45 5 41094%1
3WQC_PLP_B_402 100% 21% 0.026 0.9961.96 1.38 4 400100%1