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3VGK	Download File View File

Crystal structure of a ROK family glucokinase from Streptomyces griseus

Miyazono, K., Tabei, N., Morita, S., Ohnishi, Y., Horinouchi, S., Tanokura, M.

(2012) J Bacteriol 194: 607-616

Released	2011-12-07
Method	X-RAY DIFFRACTION 3.25 Å
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	Glucokinase (protein)
Unique Ligands	SO4, ZN

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3VGL	Download File View File

Crystal structure of a ROK family glucokinase from Streptomyces griseus in complex with glucose and AMPPNP

Miyazono, K., Tabei, N., Morita, S., Ohnishi, Y., Horinouchi, S., Tanokura, M.

(2012) J Bacteriol 194: 607-616

Released	2011-12-07
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	Glucokinase (protein)
Unique Ligands	ANP, BGC, NA, ZN

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3VGM	Download File View File

Crystal structure of a ROK family glucokinase from Streptomyces griseus in complex with glucose

Miyazono, K., Tabei, N., Morita, S., Ohnishi, Y., Horinouchi, S., Tanokura, M.

(2012) J Bacteriol 194: 607-616

Released	2011-12-07
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	Glucokinase (protein)
Unique Ligands	BGC, K, ZN

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8KAP	Download File View File

Glycoside hydrolase family 1 beta-glucosidase from Streptomyces griseus (ligand-free)

Kumakura, H., Motouchi, S., Nakai, H., Nakajima, M.

To be published

Released	2024-08-07
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	SGR_2426 (protein)
Unique Ligands	1PE, BTB, PEG, PGE

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8KAQ	Download File View File

Glycoside hydrolase family 1 beta-glucosidase (E318G mutant) from Streptomyces griseus (sophorose complex)

Kumakura, H., Motouchi, S., Nakai, H., Nakajima, M.

To be published

Released	2024-08-07
Method	X-RAY DIFFRACTION 2.13 Å
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	Putative beta-glucosidase (protein)
Unique Ligands	BGC, CL, GLC, PGE

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AF_AFB1VKZ4F1	Download File

Computed structure model of 5-oxoprolinase subunit A

AlphaFold DB	AF-B1VKZ4-F1
pLDDT (global)	96.39
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	5-oxoprolinase subunit A (protein)

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AF_AFB1VLT7F1	Download File

Computed structure model of L-carnitine dehydrogenase

AlphaFold DB	AF-B1VLT7-F1
pLDDT (global)	94.13
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	L-carnitine dehydrogenase (protein)

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AF_AFB1VM97F1	Download File

Computed structure model of Nucleoid-associated protein SGR_3378

AlphaFold DB	AF-B1VM97-F1
pLDDT (global)	88.49
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	Nucleoid-associated protein SGR_3378 (protein)

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AF_AFB1VMC3F1	Download File

Computed structure model of Adenylosuccinate synthetase

AlphaFold DB	AF-B1VMC3-F1
pLDDT (global)	94.85
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	Adenylosuccinate synthetase (protein)

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AF_AFB1VMF2F1	Download File

Computed structure model of Protein GrpE

AlphaFold DB	AF-B1VMF2-F1
pLDDT (global)	79.11
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	Protein GrpE (protein)

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AF_AFB1VMF3F1	Download File

Computed structure model of Chaperone protein DnaK

AlphaFold DB	AF-B1VMF3-F1
pLDDT (global)	89.64
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	Chaperone protein DnaK (protein)

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AF_AFB1VMF9F1	Download File

Computed structure model of dCTP deaminase, dUMP-forming

AlphaFold DB	AF-B1VMF9-F1
pLDDT (global)	96.35
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	dCTP deaminase, dUMP-forming (protein)

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AF_AFB1VMX8F1	Download File

Computed structure model of Ribosomal RNA large subunit methyltransferase G

AlphaFold DB	AF-B1VMX8-F1
pLDDT (global)	94.21
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	Ribosomal RNA large subunit methyltransferase G (protein)

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AF_AFB1VN49F1	Download File

Computed structure model of 50S ribosomal protein L33 3

AlphaFold DB	AF-B1VN49-F1
pLDDT (global)	88.41
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	50S ribosomal protein L33 3 (protein)

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AF_AFB1VN93F1	Download File

Computed structure model of 2-oxo-3-(phosphooxy)propyl 3-oxoalkanoate synthase

AlphaFold DB	AF-B1VN93-F1
pLDDT (global)	92.23
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	2-oxo-3-(phosphooxy)propyl 3-oxoalkanoate synthase (protein)

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AF_AFB1VN94F1	Download File

Computed structure model of (4-alkanoyl-5-oxo-2,5-dihydrofuran-3-yl)methyl phosphate reductase

AlphaFold DB	AF-B1VN94-F1
pLDDT (global)	97.26
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	(4-alkanoyl-5-oxo-2,5-dihydrofuran-3-yl)methyl phosphate reductase (protein)

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AF_AFB1VNF2F1	Download File

Computed structure model of D-ribose pyranase 1

AlphaFold DB	AF-B1VNF2-F1
pLDDT (global)	96.84
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	D-ribose pyranase 1 (protein)

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AF_AFB1VNN9F1	Download File

Computed structure model of Urease accessory protein UreD 1

AlphaFold DB	AF-B1VNN9-F1
pLDDT (global)	93.51
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	Urease accessory protein UreD 1 (protein)

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AF_AFB1VNP0F1	Download File

Computed structure model of Urease accessory protein UreG 3

AlphaFold DB	AF-B1VNP0-F1
pLDDT (global)	86.21
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	Urease accessory protein UreG 3 (protein)

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AF_AFB1VNY5F1	Download File

Computed structure model of Uracil phosphoribosyltransferase

AlphaFold DB	AF-B1VNY5-F1
pLDDT (global)	94.78
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	Uracil phosphoribosyltransferase (protein)

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AF_AFB1VP80F1	Download File

Computed structure model of Serine--tRNA ligase

AlphaFold DB	AF-B1VP80-F1
pLDDT (global)	96.16
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	Serine--tRNA ligase (protein)

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AF_AFB1VP90F1	Download File

Computed structure model of Probable RNA 2'-phosphotransferase

AlphaFold DB	AF-B1VP90-F1
pLDDT (global)	93.85
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	Probable RNA 2'-phosphotransferase (protein)

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AF_AFB1VP97F1	Download File

Computed structure model of Putative phenylalanine aminotransferase

AlphaFold DB	AF-B1VP97-F1
pLDDT (global)	96.12
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	Putative phenylalanine aminotransferase (protein)

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AF_AFB1VPA3F1	Download File

Computed structure model of Phosphomethylpyrimidine synthase

AlphaFold DB	AF-B1VPA3-F1
pLDDT (global)	90
Organisms	Streptomyces griseus subsp. griseus NBRC 13350
Macromolecule	Phosphomethylpyrimidine synthase (protein)