RCSB PDB: Search

2V8W \| pdb_00002v8w	Download File View File

Crystallographic and mass spectrometric characterisation of eIF4E with N7-cap derivatives

Brown, C.J., Mcnae, I., Fischer, P.M., Walkinshaw, M.D.

(2007) J Mol Biology 372: 7

Released	2007-08-28
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	EUKARYOTIC TRANSLATION INITIATION FACTOR 4E (protein) EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-BINDING PROTEIN 1 (protein)
Unique Ligands	MGO

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2V8X \| pdb_00002v8x	Download File View File

Crystallographic and mass spectrometric characterisation of eIF4E with N7-cap derivatives

Brown, C.J., Mcnae, I., Fischer, P.M., Walkinshaw, M.D.

(2007) J Mol Biology 372: 7

Released	2007-08-28
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	EUKARYOTIC TRANSLATION INITIATION FACTOR 4E (protein) EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-BINDING PROTEIN 1 (protein)
Unique Ligands	MGQ

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2V8Y \| pdb_00002v8y	Download File View File

Crystallographic and mass spectrometric characterisation of eIF4E with N7-cap derivatives

Brown, C.J., Mcnae, I., Fischer, P.M., Walkinshaw, M.D.

(2007) J Mol Biology 372: 7

Released	2007-08-28
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	EUKARYOTIC TRANSLATION INITIATION FACTOR 4E (protein) EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-BINDING PROTEIN 1 (protein)
Unique Ligands	MGV

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2W97 \| pdb_00002w97	Download File View File

Crystal Structure of eIF4E Bound to Glycerol and eIF4G1 peptide

Brown, C.J., Verma, C.S., Walkinshaw, M.D., Lane, D.P.

(2009) Cell Cycle 8: 1905-1911

Released	2010-03-31
Method	X-RAY DIFFRACTION 2.29 Å
Organisms	Homo sapiens
Macromolecule	EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 1 (protein) EUKARYOTIC TRANSLATION INITIATION FACTOR 4E (protein)
Unique Ligands	GOL, MGO, PGE, SO4

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4AZA \| pdb_00004aza	Download File View File

Improved eIF4E binding peptides by phage display guided design.

Chew, W.Z., Quah, S.T., Verma, C.S., Liu, Y., Lane, D.P., Brown, C.J.

(2012) PLoS One 7: 47235

Released	2012-08-08
Method	X-RAY DIFFRACTION 2.16 Å
Organisms	Homo sapiens
Macromolecule	EIF4G1_D5S PEPTIDE (protein) EUKARYOTIC TRANSLATION INITIATION FACTOR 4E (protein)
Unique Ligands	MGO

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4BEA \| pdb_00004bea	Download File View File

Crystal Structure of eIF4E in Complex with a Stapled Peptide Derivative

Quah, S.T., Lama, D., Verma, C.S., Lane, D.P., Brown, C.J.

(2013) Sci Rep 3: 3451

Released	2013-12-11
Method	X-RAY DIFFRACTION 2.57 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Eukaryotic translation initiation factor 4E (protein) STAPLED EIF4E INTERACTING PEPTIDE (protein)

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4UD7 \| pdb_00004ud7	Download File View File

Structure of the stapled peptide YS-02 bound to MDM2

Tan, Y.S., Reeks, J., Brown, C.J., Jennings, C.E., Eapen, R.S., Tng, Q.S., Thean, D., Ying, Y.T., Gago, F.J.F., Lane, D.P., Noble, M.E.M., Verma, C.

(2016) J Phys Chem Lett 7: 3452-3457

Released	2016-01-13
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	MDM2 (protein) YS-02 (protein)

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4UE1 \| pdb_00004ue1	Download File View File

Structure of the stapled peptide YS-01 bound to MDM2

Tan, Y.S., Reeks, J., Brown, C.J., Jennings, C.E., Eapen, R.S., Tng, Q.S., Thean, D., Ying, Y.T., Gago, F.J.F., Lane, D.P., Noble, M.E.M., Verma, C.

(2016) J Phys Chem Lett 7: 3452-3457

Released	2016-01-13
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Homo sapiens
Macromolecule	E3 UBIQUITIN-PROTEIN LIGASE MDM2 (protein) YS-01 (protein)

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4UMN \| pdb_00004umn	Download File View File

Structure of a stapled peptide antagonist bound to Nutlin-resistant Mdm2.

Chee, S., Wongsantichon, J., Quah, S., Robinson, R.C., Verma, C., Lane, D.P., Brown, C.J., Ghadessy, F.J.

(2014) PLoS One 9: e104914-e104914

Released	2014-05-28
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	E3 ubiquitin-protein ligase Mdm2 (protein) M06 (protein)

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5GW6 \| pdb_00005gw6	Download File View File

Water-Bridge Mediates Recognition of mRNA Cap in eIF4E

Brown, C.J.

(2017) Structure 25: 188-194

Released	2016-10-19
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Homo sapiens
Macromolecule	Eukaryotic translation initiation factor 4E (protein)
Unique Ligands	GOL

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5XXK \| pdb_00005xxk	Download File View File

Structure-activity studies of Mdm2/Mdm4-binding stapled peptides comprising non-natural amino acids

Brown, C.J.

(2017) PLoS One 12: e0189379-e0189379

Released	2017-12-27
Method	X-RAY DIFFRACTION 1.66 Å
Organisms	Homo sapiens Phage display vector pTDisp
Macromolecule	E3 ubiquitin-protein ligase Mdm2 (protein) Hydrocarbon stapled peptide THC-SER-PHE-0EH-GLU-TYR-6CW-ALA-LEU-LEU-MK8-NH2 (protein)

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5ZJY \| pdb_00005zjy	Download File View File

Stapled-peptides tailored against initiation of translation

Lama, D., Liberator, A., Frosi, Y., Nakhle, J., Tsomia, N., Bashir, T., Lane, D.P., Brown, C.J., Verma, C.S., Auvin, S., Ciesielski, B., Uhring, M.

(2019) Chem Sci 10: 2489-2500

Released	2019-03-20
Method	X-RAY DIFFRACTION 1.59 Å
Organisms	Homo sapiens
Macromolecule	Eukaryotic translation initiation factor 4E (protein) LYS-LYS-ARG-TYR-SER-ARG-2JN-GLN-LEU-LEU-2JN-PHE (protein)
Unique Ligands	MGP

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5ZJZ \| pdb_00005zjz	Download File View File

Stapled-peptides tailored against initiation of translation

Lama, D., Liberator, A., Frosi, Y., Nakhle, J., Tsomia, N., Bashir, T., Lane, D.P., Brown, C.J., Verma, C.S., Auvin, S., Ciesielski, F., Uhring, M.

(2019) Chem Sci 10: 2489-2500

Released	2019-02-20
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Homo sapiens
Macromolecule	Eukaryotic translation initiation factor 4 gamma 1 (protein) Eukaryotic translation initiation factor 4E (protein)
Unique Ligands	MGT

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5ZK5 \| pdb_00005zk5	Download File View File

Stapled-peptides tailored against initiation of translation

Lama, D., Liberator, A., Frosi, Y., Nakhle, J., Tsomia, N., Bashir, T., Lane, D.P., Brown, C.J., Verma, C.S., Auvin, S., Ciesielski, F., Uhring, M.

(2019) Chem Sci 10: 2489-2500

Released	2019-02-20
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Homo sapiens
Macromolecule	Eukaryotic translation initiation factor 4E (protein) LYS-ARG-TYR-SER-ARG-GLU-GLN-LEU-LEU-MK8-PHE-GLN-ARG-MK8 (protein)
Unique Ligands	MGT

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5ZK7 \| pdb_00005zk7	Download File View File

Stapled-peptides tailored against initiation of translation

Lama, D., Liberator, A., Frosi, Y., Nakhle, J., Tsomia, N., Bashir, T., Lane, D.P., Brown, C.J., Verma, C.S., Auvin, S., Ciesielski, F., Uhring, M.

(2019) Chem Sci 10: 2489-2500

Released	2019-02-20
Method	X-RAY DIFFRACTION 2.12 Å
Organisms	Homo sapiens
Macromolecule	ACE-ARG-TYR-SER-ARG-MK8-GLN-LEU-LEU-MK8-LEU-PHE-ARG-NH2 (protein) Eukaryotic translation initiation factor 4E (protein)
Unique Ligands	CL, GOL, IOD, MGT

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5ZK9 \| pdb_00005zk9	Download File View File

Stapled-peptides tailored against initiation of translation

Lama, D., Liberator, A., Frosi, Y., Nakhle, J., Tsomia, N., Bashir, T., Lane, D.P., Brown, C.J., Verma, C.S., Auvin, S., Ciesielski, F., Uhring, M.

(2019) Chem Sci 10: 2489-2500

Released	2019-02-20
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Homo sapiens
Macromolecule	ACE-ARG-ILE-ILE-TYR-SER-ARG-MK8-GLN-LEU-LEU-MK8-LEU-LYS-NH2 (protein) Eukaryotic translation initiation factor 4E (protein)
Unique Ligands	GOL, MGP, PEG

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5ZML \| pdb_00005zml	Download File View File

Stapled-peptides tailored against initiation of translation

Lama, D., Liberator, A., Frosi, Y., Nakhle, J., Tsomia, N., Bashir, T., Lane, D.P., Brown, C.J., Verma, C.S., Auvin, S., Yano, J.

(2019) Chem Sci 10: 2489-2500

Released	2019-02-20
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	ACE-LYS-LYS-ARG-TYR-SER-ARG-MK8-GLN-LEU-LEU-MK8-PHE-ARG-ARG (protein) Eukaryotic translation initiation factor 4E (protein)
Unique Ligands	EDO, NO3

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6AAW \| pdb_00006aaw	Download File View File

Mdm2 in complex with a D amino Acid Containing Stapled Peptide

Brown, C.J., Partridge, A.W.

To be published

Released	2019-07-24
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens Inovirus M13
Macromolecule	ACE-LEU-THR-PHE-STQ-GLU-TYR-DTR-GLN-LEU-CBA-MK8-SER-ALA-ALA (protein) E3 ubiquitin-protein ligase Mdm2 (protein)

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6KZU \| pdb_00006kzu	Download File View File

Macrocyclization of an all-D linear peptide improves target affinity and imparts cellular activity: A novel stapled alpha-helical peptide modality

Jiang, S., Brown, C.J.

(2020) Chem Sci 11: 5577-5591

Released	2019-10-16
Method	X-RAY DIFFRACTION 1.79 Å
Organisms	Homo sapiens Phage 13
Macromolecule	2JN-DAL-E03-DTY-2JN-DSG-TDF-DGL-MK8-DLE-DLE-2JN (protein) E3 ubiquitin-protein ligase Mdm2 (protein)

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7D6Y \| pdb_00007d6y	Download File View File

eIF4E in Complex with a Disulphide-Free Autonomous VH Domain

Brown, C.J., Frosi, Y., Jiang, S., Lin, Y.C.

To be published

Released	2021-10-06
Method	X-RAY DIFFRACTION 1.668 Å
Organisms	Homo sapiens
Macromolecule	Eukaryotic translation initiation factor 4E (protein) VH Domain (1C5) (protein)
Unique Ligands	MES, MGO

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7D8B \| pdb_00007d8b	Download File View File

Engineering Disulphide-Free Autonomous Antibody VH Domains to modulate intracellular pathways

Frosi, Y., Lin, Y.C., Jiang, S., Brown, C.J.

(2022) Nat Commun 13: 4854-4854

Released	2021-08-25
Method	X-RAY DIFFRACTION 2.46 Å
Organisms	Homo sapiens
Macromolecule	Eukaryotic translation initiation factor 4E (protein) VH-S4 (protein)

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7EZW \| pdb_00007ezw	Download File View File

Cyclic Peptide that Interacts with the eIF4E Capped-mRNA Binding Site

Brown, C.J., Ng, S., Frosi, Y.

(2022) RSC Chem Biol 3: 916-930

Released	2022-06-08
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	ALA-CYS-GLU-MET-GLY-PHE-PHE-GLN-ASP-CYS-GLY (protein) Eukaryotic translation initiation factor 4E (protein)
Unique Ligands	NA

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7F07 \| pdb_00007f07	Download File View File

Autonomous VH domain that interacts with eIF4E at the Capped mRNA Binding site.

Brown, C.J., Frosi, Y., Ng, S., Lin, Y.C.

(2022) RSC Chem Biol 3: 916-930

Released	2022-06-08
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Eukaryotic translation initiation factor 4E (protein) VH domain (VH-DiFCAP-01) (protein)

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7XTP \| pdb_00007xtp	Download File View File

eIF4E in Complex with a Disulphide-Free Autonomous VH Domain

Brown, C.J., Frosi, Y., Jiang, S., Lin, Y.C.

(2022) Nat Commun 13: 4854-4854

Released	2022-07-27
Method	X-RAY DIFFRACTION 1.828 Å
Organisms	Homo sapiens
Macromolecule	Eukaryotic translation initiation factor 4E (protein) VH-S4ss (protein)
Unique Ligands	MGO

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8GU0 \| pdb_00008gu0	Download File View File

Crystal structure of a fungal halogenase RadH

Jiang, S.M., Brown, C.J.

(2023) Biomolecules 13:

Released	2023-07-26
Method	X-RAY DIFFRACTION 2.42 Å
Organisms	Floropilus chiversii
Macromolecule	Non-heme halogenase radH (protein)
Unique Ligands	CL, FAD, PG4

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Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2V8W | pdb_00002v8w

2V8X | pdb_00002v8x

2V8Y | pdb_00002v8y

2W97 | pdb_00002w97

4AZA | pdb_00004aza

4BEA | pdb_00004bea

4UD7 | pdb_00004ud7

4UE1 | pdb_00004ue1

4UMN | pdb_00004umn

5GW6 | pdb_00005gw6

5XXK | pdb_00005xxk

5ZJY | pdb_00005zjy

5ZJZ | pdb_00005zjz

5ZK5 | pdb_00005zk5

5ZK7 | pdb_00005zk7

5ZK9 | pdb_00005zk9

5ZML | pdb_00005zml

6AAW | pdb_00006aaw

6KZU | pdb_00006kzu

7D6Y | pdb_00007d6y

7D8B | pdb_00007d8b

7EZW | pdb_00007ezw

7F07 | pdb_00007f07

7XTP | pdb_00007xtp

8GU0 | pdb_00008gu0