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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Davies, G.J."

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Search Summary

This query matches 751 Structures.

Refinements

Structure Determination Methodology

experimental (751)

Scientific Name of Source Organism

	Bacteroides thetaiotaomicron VPI-5482 (73)
	Homo sapiens (71)
	Cellvibrio japonicus (44)
	Acetivibrio thermocellus (28)
	Bacteroides xylanisolvens XB1A (28)
	Thermotoga maritima (27)
	Salipaludibacillus agaradhaerens (26)
	Cellvibrio japonicus Ueda107 (21)
	Mycothermus thermophilus (21)
	Bacteroides thetaiotaomicron (18)

More...

Taxonomy

	Bacteria (546)
	Eukaryota (198)
	Archaea (7)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (744)
	ELECTRON MICROSCOPY (7)

Polymer Entity Type

	Protein (750)
	DNA (1)

Refinement Resolution (Å)

	0.5 - 1.0 (12)
	1.0 - 1.5 (147)
	1.5 - 2.0 (364)
	2.0 - 2.5 (182)
	2.5 - 3.0 (36)
	3.0 - 3.5 (8)
	3.5 - 4.0 (1)
	> 4.5 (1)

Release Date

	1990 - 1994 (2)
	1995 - 1999 (25)
	2000 - 2004 (119)
	2005 - 2009 (134)
	2010 - 2014 (106)
	2015 - 2019 (180)
	2020 - 2024 (174)
	2025 - 2029 (11)

Enzyme Classification Name

	Hydrolases (486)
	Transferases (85)
	Oxidoreductases (24)
	Lyases (12)
	Isomerases (7)

Membrane Protein Annotation

OPM (4)

Symmetry Type

	Asymmetric (584)
	Cyclic (128)
	Dihedral (43)

SCOP Classification

	Alpha and beta proteins (a/b) (261)
	All beta proteins (125)
	Artifacts (56)
	Alpha and beta proteins (a+b) (30)
	All alpha proteins (38)

AllSelected

1 to 25 of 751 Structures

Page 1 of 31

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182D \| pdb_0000182d	Download File View File

DNA-NOGALAMYCIN INTERACTIONS: THE CRYSTAL STRUCTURE OF D(TGATCA) COMPLEXED WITH NOGALAMYCIN

Smith, C.K., Davies, G.J., Dodson, E.J., Moore, M.H.

(1995) Biochemistry 34: 415-425

Released	1994-11-30
Method	X-RAY DIFFRACTION 1.8 Å
Macromolecule	DNA (5'-D(TPGPAPTPCPA)-3') (nucleic acid)
Unique Ligands	NGM

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1A39 \| pdb_00001a39	Download File View File

HUMICOLA INSOLENS ENDOCELLULASE EGI S37W, P39W DOUBLE-MUTANT

Davies, G.J., Ducros, V., Lewis, R.J., Borchert, T.V., Schulein, M.

(1997) J Biotechnol 57: 91-100

Released	1999-03-02
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Mycothermus thermophilus
Macromolecule	ENDOGLUCANASE I (protein)
Unique Ligands	NAG

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1A3H \| pdb_00001a3h	Download File View File

ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHERANS AT 1.6A RESOLUTION

Davies, G.J., Brzozowski, A.M., Andersen, K., Schulein, M.

(1998) Biochemistry 37: 1926-1932

Released	1999-03-16
Method	X-RAY DIFFRACTION 1.57 Å
Organisms	Salipaludibacillus agaradhaerens
Macromolecule	ENDOGLUCANASE (protein)

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1B65 \| pdb_00001b65	Download File View File

Structure of l-aminopeptidase d-ala-esterase/amidase from ochrobactrum anthropi, a prototype for the serine aminopeptidases, reveals a new variant among the ntn hydrolase fold

Bompard-Gilles, C., Villeret, V., Davies, G.J., Fanuel, L., Joris, B., Frere, J.M., Van Beeumen, J.

(2000) Structure 8: 153-162

Released	1999-07-23
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Brucella anthropi
Macromolecule	PROTEIN (AMINOPEPTIDASE) (protein)

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1BVW \| pdb_00001bvw	Download File View File

CELLOBIOHYDROLASE II (CEL6A) FROM HUMICOLA INSOLENS

Varrot, A., Davies, G.J., Schulein, M.

(1999) Biochem J 337: 297-304

Released	1999-09-18
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Mycothermus thermophilus
Macromolecule	PROTEIN (CELLOBIOHYDROLASE II) (protein)
Unique Ligands	GOL, MAN, MG, NAG

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1CZ1 \| pdb_00001cz1	Download File View File

EXO-B-(1,3)-GLUCANASE FROM CANDIDA ALBICANS AT 1.85 A RESOLUTION

Cutfield, S.M., Davies, G.J., Murshudov, G., Anderson, B.F., Moody, P.C.E., Sullivan, P.A., Cutfield, J.F.

(1999) J Mol Biology 294: 771-783

Released	2000-01-03
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Candida albicans
Macromolecule	PROTEIN (EXO-B-(1,3)-GLUCANASE) (protein)

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1DYM \| pdb_00001dym	Download File View File

Humicola insolens Endocellulase Cel7B (EG 1) E197A Mutant

Davies, G.J., Moraz, O., Driguez, H., Schulein, M.

(1998) Biochem J 335 ( Pt 2): 409-416

Released	2000-02-04
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Mycothermus thermophilus
Macromolecule	ENDOGLUCANASE I (protein)
Unique Ligands	NAG

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1DYO \| pdb_00001dyo	Download File View File

Xylan-Binding Domain from CBM 22, formally x6b domain

Davies, G.J., Charnock, S.J., Gilbert, H.J., Fontes, C.M.G.A.

(2000) Biochemistry 39: 5013

Released	2000-07-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Acetivibrio thermocellus
Macromolecule	ENDO-1,4-BETA-XYLANASE Y (protein)
Unique Ligands	CA

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1DYS \| pdb_00001dys	Download File View File

Endoglucanase CEL6B from Humicola insolens

Davies, G.J., Brzozowski, A.M., Dauter, M., Varrot, A., Schulein, M.

(2000) Biochem J 348: 201

Released	2001-02-08
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Mycothermus thermophilus
Macromolecule	ENDOGLUCANASE (protein)

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1E0V \| pdb_00001e0v	Download File View File

Xylanase 10A from Sreptomyces lividans. cellobiosyl-enzyme intermediate at 1.7 A

Ducros, V., Charnock, S.J., Derewenda, U., Derewenda, Z.S., Dauter, Z., Dupont, C., Shareck, F., Morosoli, R., Kluepfel, D., Davies, G.J.

(2000) J Biological Chem 275: 23020

Released	2001-04-05
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Streptomyces lividans
Macromolecule	ENDO-1,4-BETA-XYLANASE A (protein)
Unique branched monosaccharides	BGC, G2F

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1E0W \| pdb_00001e0w	Download File View File

Xylanase 10A from Sreptomyces lividans. native structure at 1.2 angstrom resolution

Ducros, V., Charnock, S.J., Derewenda, U., Derewenda, Z.S., Dauter, Z., Dupont, C., Shareck, F., Morosoli, R., Kluepfel, D., Davies, G.J.

(2000) J Biological Chem 275: 23020

Released	2001-04-05
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Streptomyces lividans
Macromolecule	ENDO-1,4-BETA-XYLANASE A (protein)

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1E0X \| pdb_00001e0x	Download File View File

XYLANASE 10A FROM SREPTOMYCES LIVIDANS. XYLOBIOSYL-ENZYME INTERMEDIATE AT 1.65 A

Ducros, V., Charnock, S.J., Derewenda, U., Derewenda, Z.S., Dauter, Z., Dupont, C., Shareck, F., Morosoli, R., Kluepfel, D., Davies, G.J.

(2000) J Biological Chem 275: 23020

Released	2001-04-05
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Streptomyces lividans
Macromolecule	ENDO-1,4-BETA-XYLANASE A (protein)
Unique Ligands	GOL
Unique branched monosaccharides	X2F, XYP

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1E3X \| pdb_00001e3x	Download File View File

Native structure of chimaeric amylase from B. amyloliquefaciens and B. licheniformis at 1.92A

Brzozowski, A.M., Lawson, D.M., Turkenburg, J.P., Bisgaard-Frantzen, H., Svendsen, A., Borchert, T.V., Dauter, Z., Wilson, K.S., Davies, G.J.

(2000) Biochemistry 39: 9099

Released	2001-06-21
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Bacillus amyloliquefaciens
Macromolecule	ALPHA-AMYLASE (protein)
Unique Ligands	CA, NA

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1E3Z \| pdb_00001e3z	Download File View File

Acarbose complex of chimaeric amylase from B. amyloliquefaciens and B. licheniformis at 1.93A

Brzozowski, A.M., Lawson, D.M., Turkenburg, J.P., Bisgaard-Frantzen, H., Svendsen, A., Borchert, T.V., Dauter, Z., Wilson, K.S., Davies, G.J.

(2000) Biochemistry 39: 9099

Released	2001-06-21
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Bacillus amyloliquefaciens
Macromolecule	ALPHA-AMYLASE (protein)
Unique Ligands	ACI, CA, NA
Unique branched monosaccharides	GLC, GLD

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1E40 \| pdb_00001e40	Download File View File

Tris/maltotriose complex of chimaeric amylase from B. amyloliquefaciens and B. licheniformis at 2.2A

Brzozowski, A.M., Lawson, D.M., Turkenburg, J.P., Bisgaard-Frantzen, H., Svendsen, A., Borchert, T.V., Dauter, Z., Wilson, K.S., Davies, G.J.

(2000) Biochemistry 39: 9099

Released	2001-06-21
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bacillus amyloliquefaciens
Macromolecule	ALPHA-AMYLASE (protein)
Unique Ligands	CA, NA, TRS
Unique branched monosaccharides	GLC

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1E43 \| pdb_00001e43	Download File View File

Native structure of chimaeric amylase from B. amyloliquefaciens and B. licheniformis at 1.7A

Brzozowski, A.M., Lawson, D.M., Turkenburg, J.P., Bisgaard-Frantzen, H., Svendsen, A., Borchert, T.V., Dauter, Z., Wilson, K.S., Davies, G.J.

(2000) Biochemistry 39: 9099

Released	2001-06-21
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Bacillus amyloliquefaciens
Macromolecule	ALPHA-AMYLASE (protein)
Unique Ligands	CA, NA

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1E5J \| pdb_00001e5j	Download File View File

ENDOGLUCANASE CEL5A FROM BACILLUS AGARADHAERENS IN THE TETRAGONAL CRYSTAL FORM IN COMPLEX WITH METHYL-4II-S-ALPHA-CELLOBIOSYL-4II-THIO-BETA-CELLOBIOSIDE

Fort, S., Varrot, A., Schulein, M., Cottaz, S., Driguez, H., Davies, G.J.

(2001) Chembiochem 2: 319

Released	2001-07-26
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Salipaludibacillus agaradhaerens
Macromolecule	ENDOGLUCANASE 5A (protein)
Unique Ligands	CA
Unique branched monosaccharides	GLC, MGL, SGC

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1EQC \| pdb_00001eqc	Download File View File

EXO-B-(1,3)-GLUCANASE FROM CANDIDA ALBICANS IN COMPLEX WITH CASTANOSPERMINE AT 1.85 A

Cutfield, S.M., Davies, G.J., Murshudov, G., Anderson, B.F., Moody, P.C.E., Sullivan, P.A., Cutfield, J.F.

(1999) J Mol Biology 294: 771-783

Released	2000-10-03
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Candida albicans
Macromolecule	EXO-(B)-(1,3)-GLUCANASE (protein)
Unique Ligands	CTS

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1GKK \| pdb_00001gkk	Download File View File

Feruloyl esterase domain of XynY from clostridium thermocellum

Prates, J.A.M., Tarbouriech, N., Charnock, S.J., Fontes, C.M.G.A., Ferreira, L.M.A., Davies, G.J.

(2001) Structure 9: 1183

Released	2001-12-13
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Acetivibrio thermocellus
Macromolecule	ENDO-1,4-BETA-XYLANASE Y (protein)
Unique Ligands	CD, GOL

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1GKL \| pdb_00001gkl	Download File View File

S954A mutant of the feruloyl esterase module from clostridium thermocellum complexed with ferulic acid

Prates, J.A.M., Tarbouriech, N., Charnock, S.J., Fontes, C.M.G.A., Ferreira, L.M.A., Davies, G.J.

(2001) Structure 9: 1183-1190

Released	2001-12-13
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Acetivibrio thermocellus
Macromolecule	ENDO-1,4-BETA-XYLANASE Y (protein)
Unique Ligands	ACT, CD, FER, GOL

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1GNY \| pdb_00001gny	Download File View File

xylan-binding module CBM15

Szabo, S., Jamal, S., Xie, H., Charnock, S.J., Bolam, D.N., Gilbert, H.J., Davies, G.J.

(2001) J Biological Chem 276: 49061

Released	2001-11-29
Method	X-RAY DIFFRACTION 1.63 Å
Organisms	Cellvibrio japonicus
Macromolecule	XYLANASE 10C (protein)
Unique Ligands	NA
Unique branched monosaccharides	XYP

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1GQI \| pdb_00001gqi	Download File View File

Structure of Pseudomonas cellulosa alpha-D-glucuronidase

Nurizzo, D., Nagy, T., Gilbert, H.J., Davies, G.J.

(2002) Structure 10: 547

Released	2002-09-26
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Cellvibrio japonicus
Macromolecule	ALPHA-GLUCURONIDASE (protein)
Unique Ligands	CO, EDO, MG

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1GQJ \| pdb_00001gqj	Download File View File

Structure of Pseudomonas cellulosa alpha-D-glucuronidase complexed with xylobiose

Nurizzo, D., Nagy, T., Gilbert, H.J., Davies, G.J.

(2002) Structure 10: 547

Released	2002-09-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Cellvibrio japonicus
Macromolecule	ALPHA-D-GLUCURONIDASE (protein)
Unique Ligands	CO, EDO
Unique branched monosaccharides	XYP

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1GQK \| pdb_00001gqk	Download File View File

Structure of Pseudomonas cellulosa alpha-D-glucuronidase complexed with glucuronic acid

Nurizzo, D., Nagy, T., Gilbert, H.J., Davies, G.J.

(2002) Structure 10: 547

Released	2002-09-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Cellvibrio japonicus
Macromolecule	ALPHA-D-GLUCURONIDASE (protein)
Unique Ligands	BDP, CO, EDO

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1GQL \| pdb_00001gql	Download File View File

Structure of Pseudomonas cellulosa alpha-D-glucuronidase complexed with glucuronic acid and xylotriose

Nurizzo, D., Nagy, T., Gilbert, H.J., Davies, G.J.

(2002) Structure 10: 547

Released	2002-09-26
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Cellvibrio japonicus
Macromolecule	ALPHA-D-GLUCURONIDASE (protein)
Unique Ligands	BDP, CO, EDO
Unique branched monosaccharides	XYP

1 to 25 of 751 Structures

Page 1 of 31

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

182D | pdb_0000182d

1A39 | pdb_00001a39

1A3H | pdb_00001a3h

1B65 | pdb_00001b65

1BVW | pdb_00001bvw

1CZ1 | pdb_00001cz1

1DYM | pdb_00001dym

1DYO | pdb_00001dyo

1DYS | pdb_00001dys

1E0V | pdb_00001e0v

1E0W | pdb_00001e0w

1E0X | pdb_00001e0x

1E3X | pdb_00001e3x

1E3Z | pdb_00001e3z

1E40 | pdb_00001e40

1E43 | pdb_00001e43

1E5J | pdb_00001e5j

1EQC | pdb_00001eqc

1GKK | pdb_00001gkk

1GKL | pdb_00001gkl

1GNY | pdb_00001gny

1GQI | pdb_00001gqi

1GQJ | pdb_00001gqj

1GQK | pdb_00001gqk

1GQL | pdb_00001gql