RCSB PDB: Search

1PW2 \| pdb_00001pw2	Download File View File

APO STRUCTURE OF HUMAN CYCLIN-DEPENDENT KINASE 2

Wu, S.Y., McNae, I., Kontopidis, G., McClue, S.J., McInnes, C., Stewart, K.J., Wang, S., Zheleva, D.I., Marriage, H., Lane, D.P., Taylor, P., Fischer, P.M., Walkinshaw, M.D.

(2003) Structure 11: 399-410

Released	2003-12-09
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	Cell division protein kinase 2 (protein)

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1PXI \| pdb_00001pxi	Download File View File

HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE INHIBITOR 4-(2,5-Dichloro-thiophen-3-yl)-pyrimidin-2-ylamine

Wu, S.Y., McNae, I., Kontopidis, G., McClue, S.J., McInnes, C., Stewart, K.J., Wang, S., Zheleva, D.I., Marriage, H., Lane, D.P., Taylor, P., Fischer, P.M., Walkinshaw, M.D.

(2003) Structure 11: 399-410

Released	2003-12-09
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	Cell division protein kinase 2 (protein)
Unique Ligands	CK1

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1PXJ \| pdb_00001pxj	Download File View File

HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE INHIBITOR 4-(2,4-Dimethyl-thiazol-5-yl)-pyrimidin-2-ylamine

Wu, S.Y., McNae, I., Kontopidis, G., McClue, S.J., McInnes, C., Stewart, K.J., Wang, S., Zheleva, D.I., Marriage, H., Lane, D.P., Taylor, P., Fischer, P.M., Walkinshaw, M.D.

(2003) Structure 11: 399-410

Released	2003-12-09
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Cell division protein kinase 2 (protein)
Unique Ligands	CK2

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1PXK \| pdb_00001pxk	Download File View File

HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE INHIBITOR N-[4-(2,4-Dimethyl-thiazol-5-yl)pyrimidin-2-yl]-N'-hydroxyiminoformamide

Wu, S.Y., McNae, I., Kontopidis, G., McClue, S.J., McInnes, C., Stewart, K.J., Wang, S., Zheleva, D.I., Marriage, H., Lane, D.P., Taylor, P., Fischer, P.M., Walkinshaw, M.D.

(2003) Structure 11: 399-410

Released	2003-12-09
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	Cell division protein kinase 2 (protein)
Unique Ligands	CK3

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1PXL \| pdb_00001pxl	Download File View File

HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE INHIBITOR [4-(2,4-Dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-(4-trifluoromethyl-phenyl)-amine

Wu, S.Y., McNae, I., Kontopidis, G., McClue, S.J., McInnes, C., Stewart, K.J., Wang, S., Zheleva, D.I., Marriage, H., Lane, D.P., Taylor, P., Fischer, P.M., Walkinshaw, M.D.

(2003) Structure 11: 399-410

Released	2003-12-09
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Cell division protein kinase 2 (protein)
Unique Ligands	CK4

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2W97 \| pdb_00002w97	Download File View File

Crystal Structure of eIF4E Bound to Glycerol and eIF4G1 peptide

Brown, C.J., Verma, C.S., Walkinshaw, M.D., Lane, D.P.

(2009) Cell Cycle 8: 1905-1911

Released	2010-03-31
Method	X-RAY DIFFRACTION 2.29 Å
Organisms	Homo sapiens
Macromolecule	EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 1 (protein) EUKARYOTIC TRANSLATION INITIATION FACTOR 4E (protein)
Unique Ligands	GOL, MGO, PGE, SO4

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2XMY \| pdb_00002xmy	Download File View File

Discovery and Characterisation of 2-Anilino-4-(thiazol-5-yl) pyrimidine Transcriptional CDK Inhibitors as Anticancer Agents

Wang, S., Griffiths, G., Midgley, C.A., Barnett, A.L., Cooper, M., Grabarek, J., Ingram, L., Jackson, W., Kontopidis, G., McClue, S.J., McInnes, C., McLachlan, J., Meades, C., Mezna, M., Stuart, I., Thomas, M.P., Zheleva, D.I., Lane, D.P., Jackson, R.C., Glover, D.M., Blake, D.G., Fischer, P.M.

(2010) Chem Biol 17: 1111

Released	2010-11-10
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	CELL DIVISION PROTEIN KINASE 2 (protein)
Unique Ligands	CDK

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2XNB \| pdb_00002xnb	Download File View File

Discovery and Characterisation of 2-Anilino-4-(thiazol-5-yl) pyrimidine Transcriptional CDK Inhibitors as Anticancer Agents

Wang, S., Griffiths, G., Midgley, C.A., Barnett, A.L., Cooper, M., Grabarek, J., Ingram, L., Jackson, W., Kontopidis, G., McClue, S.J., McInnes, C., McLachlan, J., Meades, C., Mezna, M., Stuart, I., Thomas, M.P., Zheleva, D.I., Lane, D.P., Jackson, R.C., Glover, D.M., Blake, D.G., Fischer, P.M.

(2010) Chem Biol 17: 1111

Released	2010-11-10
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	CELL DIVISION PROTEIN KINASE 2 (protein)
Unique Ligands	Y8L

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4AZA \| pdb_00004aza	Download File View File

Improved eIF4E binding peptides by phage display guided design.

Chew, W.Z., Quah, S.T., Verma, C.S., Liu, Y., Lane, D.P., Brown, C.J.

(2012) PLoS One 7: 47235

Released	2012-08-08
Method	X-RAY DIFFRACTION 2.16 Å
Organisms	Homo sapiens
Macromolecule	EIF4G1_D5S PEPTIDE (protein) EUKARYOTIC TRANSLATION INITIATION FACTOR 4E (protein)
Unique Ligands	MGO

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4BEA \| pdb_00004bea	Download File View File

Crystal Structure of eIF4E in Complex with a Stapled Peptide Derivative

Quah, S.T., Lama, D., Verma, C.S., Lane, D.P., Brown, C.J.

(2013) Sci Rep 3: 3451

Released	2013-12-11
Method	X-RAY DIFFRACTION 2.57 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Eukaryotic translation initiation factor 4E (protein) STAPLED EIF4E INTERACTING PEPTIDE (protein)

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4UD7 \| pdb_00004ud7	Download File View File

Structure of the stapled peptide YS-02 bound to MDM2

Tan, Y.S., Reeks, J., Brown, C.J., Jennings, C.E., Eapen, R.S., Tng, Q.S., Thean, D., Ying, Y.T., Gago, F.J.F., Lane, D.P., Noble, M.E.M., Verma, C.

(2016) J Phys Chem Lett 7: 3452-3457

Released	2016-01-13
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	MDM2 (protein) YS-02 (protein)

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4UE1 \| pdb_00004ue1	Download File View File

Structure of the stapled peptide YS-01 bound to MDM2

Tan, Y.S., Reeks, J., Brown, C.J., Jennings, C.E., Eapen, R.S., Tng, Q.S., Thean, D., Ying, Y.T., Gago, F.J.F., Lane, D.P., Noble, M.E.M., Verma, C.

(2016) J Phys Chem Lett 7: 3452-3457

Released	2016-01-13
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Homo sapiens
Macromolecule	E3 UBIQUITIN-PROTEIN LIGASE MDM2 (protein) YS-01 (protein)

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4UMN \| pdb_00004umn	Download File View File

Structure of a stapled peptide antagonist bound to Nutlin-resistant Mdm2.

Chee, S., Wongsantichon, J., Quah, S., Robinson, R.C., Verma, C., Lane, D.P., Brown, C.J., Ghadessy, F.J.

(2014) PLoS One 9: e104914-e104914

Released	2014-05-28
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	E3 ubiquitin-protein ligase Mdm2 (protein) M06 (protein)

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5ZJY \| pdb_00005zjy	Download File View File

Stapled-peptides tailored against initiation of translation

Lama, D., Liberator, A., Frosi, Y., Nakhle, J., Tsomia, N., Bashir, T., Lane, D.P., Brown, C.J., Verma, C.S., Auvin, S., Ciesielski, B., Uhring, M.

(2019) Chem Sci 10: 2489-2500

Released	2019-03-20
Method	X-RAY DIFFRACTION 1.59 Å
Organisms	Homo sapiens
Macromolecule	Eukaryotic translation initiation factor 4E (protein) LYS-LYS-ARG-TYR-SER-ARG-2JN-GLN-LEU-LEU-2JN-PHE (protein)
Unique Ligands	MGP

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5ZJZ \| pdb_00005zjz	Download File View File

Stapled-peptides tailored against initiation of translation

Lama, D., Liberator, A., Frosi, Y., Nakhle, J., Tsomia, N., Bashir, T., Lane, D.P., Brown, C.J., Verma, C.S., Auvin, S., Ciesielski, F., Uhring, M.

(2019) Chem Sci 10: 2489-2500

Released	2019-02-20
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Homo sapiens
Macromolecule	Eukaryotic translation initiation factor 4 gamma 1 (protein) Eukaryotic translation initiation factor 4E (protein)
Unique Ligands	MGT

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5ZK5 \| pdb_00005zk5	Download File View File

Stapled-peptides tailored against initiation of translation

Lama, D., Liberator, A., Frosi, Y., Nakhle, J., Tsomia, N., Bashir, T., Lane, D.P., Brown, C.J., Verma, C.S., Auvin, S., Ciesielski, F., Uhring, M.

(2019) Chem Sci 10: 2489-2500

Released	2019-02-20
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Homo sapiens
Macromolecule	Eukaryotic translation initiation factor 4E (protein) LYS-ARG-TYR-SER-ARG-GLU-GLN-LEU-LEU-MK8-PHE-GLN-ARG-MK8 (protein)
Unique Ligands	MGT

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5ZK7 \| pdb_00005zk7	Download File View File

Stapled-peptides tailored against initiation of translation

Lama, D., Liberator, A., Frosi, Y., Nakhle, J., Tsomia, N., Bashir, T., Lane, D.P., Brown, C.J., Verma, C.S., Auvin, S., Ciesielski, F., Uhring, M.

(2019) Chem Sci 10: 2489-2500

Released	2019-02-20
Method	X-RAY DIFFRACTION 2.12 Å
Organisms	Homo sapiens
Macromolecule	ACE-ARG-TYR-SER-ARG-MK8-GLN-LEU-LEU-MK8-LEU-PHE-ARG-NH2 (protein) Eukaryotic translation initiation factor 4E (protein)
Unique Ligands	CL, GOL, IOD, MGT

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5ZK9 \| pdb_00005zk9	Download File View File

Stapled-peptides tailored against initiation of translation

Lama, D., Liberator, A., Frosi, Y., Nakhle, J., Tsomia, N., Bashir, T., Lane, D.P., Brown, C.J., Verma, C.S., Auvin, S., Ciesielski, F., Uhring, M.

(2019) Chem Sci 10: 2489-2500

Released	2019-02-20
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Homo sapiens
Macromolecule	ACE-ARG-ILE-ILE-TYR-SER-ARG-MK8-GLN-LEU-LEU-MK8-LEU-LYS-NH2 (protein) Eukaryotic translation initiation factor 4E (protein)
Unique Ligands	GOL, MGP, PEG

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5ZML \| pdb_00005zml	Download File View File

Stapled-peptides tailored against initiation of translation

Lama, D., Liberator, A., Frosi, Y., Nakhle, J., Tsomia, N., Bashir, T., Lane, D.P., Brown, C.J., Verma, C.S., Auvin, S., Yano, J.

(2019) Chem Sci 10: 2489-2500

Released	2019-02-20
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	ACE-LYS-LYS-ARG-TYR-SER-ARG-MK8-GLN-LEU-LEU-MK8-PHE-ARG-ARG (protein) Eukaryotic translation initiation factor 4E (protein)
Unique Ligands	EDO, NO3

1PW2 | pdb_00001pw2

APO STRUCTURE OF HUMAN CYCLIN-DEPENDENT KINASE 2

1PXI | pdb_00001pxi

HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE INHIBITOR 4-(2,5-Dichloro-thiophen-3-yl)-pyrimidin-2-ylamine

1PXJ | pdb_00001pxj

HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE INHIBITOR 4-(2,4-Dimethyl-thiazol-5-yl)-pyrimidin-2-ylamine

1PXK | pdb_00001pxk

HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE INHIBITOR N-[4-(2,4-Dimethyl-thiazol-5-yl)pyrimidin-2-yl]-N'-hydroxyiminoformamide

1PXL | pdb_00001pxl

HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE INHIBITOR [4-(2,4-Dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-(4-trifluoromethyl-phenyl)-amine

2W97 | pdb_00002w97

Crystal Structure of eIF4E Bound to Glycerol and eIF4G1 peptide

2XMY | pdb_00002xmy

Discovery and Characterisation of 2-Anilino-4-(thiazol-5-yl) pyrimidine Transcriptional CDK Inhibitors as Anticancer Agents

2XNB | pdb_00002xnb

Discovery and Characterisation of 2-Anilino-4-(thiazol-5-yl) pyrimidine Transcriptional CDK Inhibitors as Anticancer Agents

4AZA | pdb_00004aza

Improved eIF4E binding peptides by phage display guided design.

4BEA | pdb_00004bea

Crystal Structure of eIF4E in Complex with a Stapled Peptide Derivative

4UD7 | pdb_00004ud7

Structure of the stapled peptide YS-02 bound to MDM2

4UE1 | pdb_00004ue1

Structure of the stapled peptide YS-01 bound to MDM2

4UMN | pdb_00004umn

Structure of a stapled peptide antagonist bound to Nutlin-resistant Mdm2.

5ZJY | pdb_00005zjy

Stapled-peptides tailored against initiation of translation

5ZJZ | pdb_00005zjz

Stapled-peptides tailored against initiation of translation

5ZK5 | pdb_00005zk5

Stapled-peptides tailored against initiation of translation

5ZK7 | pdb_00005zk7

Stapled-peptides tailored against initiation of translation

5ZK9 | pdb_00005zk9

Stapled-peptides tailored against initiation of translation

5ZML | pdb_00005zml

Stapled-peptides tailored against initiation of translation

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Structure Determination Methodology

Scientific Name of Source Organism

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Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1PW2 | pdb_00001pw2

1PXI | pdb_00001pxi

1PXJ | pdb_00001pxj

1PXK | pdb_00001pxk

1PXL | pdb_00001pxl

2W97 | pdb_00002w97

2XMY | pdb_00002xmy

2XNB | pdb_00002xnb

4AZA | pdb_00004aza

4BEA | pdb_00004bea

4UD7 | pdb_00004ud7

4UE1 | pdb_00004ue1

4UMN | pdb_00004umn

5ZJY | pdb_00005zjy

5ZJZ | pdb_00005zjz

5ZK5 | pdb_00005zk5

5ZK7 | pdb_00005zk7

5ZK9 | pdb_00005zk9

5ZML | pdb_00005zml