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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Sok, P."

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Search Summary

This query matches 21 Structures.

Refinements

Structure Determination Methodology

experimental (21)

Scientific Name of Source Organism

	Homo sapiens (21)
	Human herpesvirus 8 strain GK18 (2)
	synthetic construct (2)

Taxonomy

	Eukaryota (21)
	Duplodnaviria (2)
	other sequences (2)

Experimental Method

X-RAY DIFFRACTION (21)

Polymer Entity Type

Protein (21)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (11)
	2.0 - 2.5 (4)
	2.5 - 3.0 (4)
	3.5 - 4.0 (1)

Release Date

2020 - 2024 (21)

Enzyme Classification Name

	Transferases (18)
	Hydrolases (3)

Symmetry Type

Asymmetric (21)

AllSelected

1 to 21 of 21 Structures

Page 1 of 1

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6TCA \| pdb_00006tca	Download File View File

Phosphorylated p38 and MAPKAPK2 complex with inhibitor

Sok, P., Remenyi, A.

(2020) Structure 28: 1101-1113.e5

Released	2020-07-22
Method	X-RAY DIFFRACTION 3.7 Å
Organisms	Homo sapiens
Macromolecule	MAP kinase-activated protein kinase 2 (protein) Mitogen-activated protein kinase 14 (protein)
Unique Ligands	39G

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6ZQS \| pdb_00006zqs	Download File View File

Crystal structure of double-phosphorylated p38alpha with ATF2(83-102)

Kirsch, K., Sok, P., Poti, A.L., Remenyi, A.

(2020) Nat Commun 11: 5769-5769

Released	2020-11-18
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	Cyclic AMP-dependent transcription factor ATF-2 (protein) Mitogen-activated protein kinase 14 (protein)
Unique Ligands	3FF

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7OPM \| pdb_00007opm	Download File View File

Phosphorylated ERK2 in complex with ORF45

Sok, P., Remenyi, A., Alexa, A., Poti, A.

(2022) Nat Commun 13: 472-472

Released	2022-02-02
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Homo sapiens Human herpesvirus 8 strain GK18 synthetic construct
Macromolecule	Mitogen-activated protein kinase 1 (protein) Protein ORF45 (protein) synthetic ERK2 inhibitor peptide (protein)
Unique Ligands	08G, GOL

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7OPO \| pdb_00007opo	Download File View File

RSK2 N-terminal kinase domain in complex with ORF45

Sok, P., Remenyi, A., Alexa, A., Poti, A.

(2022) Nat Commun 13: 472-472

Released	2022-02-02
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Homo sapiens Human herpesvirus 8 strain GK18
Macromolecule	Protein ORF45 (protein) Ribosomal protein S6 kinase alpha-3 (protein)
Unique Ligands	ANP

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7PPL \| pdb_00007ppl	Download File View File

SHP2 catalytic domain in complex with IRS1 (625-639) phosphopeptide (pTyr-632, pSer-636)

Sok, P., Zeke, A., Remenyi, A.

(2022) Nat Commun 13: 5439-5439

Released	2022-09-07
Method	X-RAY DIFFRACTION 1.53 Å
Organisms	Homo sapiens
Macromolecule	Insulin receptor substrate 1 (protein) Tyrosine-protein phosphatase non-receptor type 11,Tyrosine-protein phosphatase non-receptor type 11 (protein)
Unique Ligands	EOH, GOL

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7PPM \| pdb_00007ppm	Download File View File

SHP2 catalytic domain in complex with IRS1 (889-901) phosphopeptide (pSer-892, pTyr-896)

Sok, P., Zeke, A., Remenyi, A.

(2022) Nat Commun 13: 5439-5439

Released	2022-09-07
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Homo sapiens
Macromolecule	Insulin receptor substrate 1 (protein) Tyrosine-protein phosphatase non-receptor type 11,Tyrosine-protein phosphatase non-receptor type 11 (protein)
Unique Ligands	GOL

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7PPN \| pdb_00007ppn	Download File View File

SHP2 catalytic domain in complex with CD28 (183-198) phosphopeptide (pTyr-191, p-Thr-195)

Sok, P., Zeke, A., Remenyi, A.

(2022) Nat Commun 13: 5439-5439

Released	2022-09-07
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	T-cell-specific surface glycoprotein CD28 (protein) Tyrosine-protein phosphatase non-receptor type 11,Tyrosine-protein phosphatase non-receptor type 11 (protein)
Unique Ligands	GOL

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8PSR \| pdb_00008psr	Download File View File

ERK2 covalently bound to SynthRevD-12-opt artificial peptide

Sok, P., Poti, A., Gogl, G., Remenyi, A.

(2024) Nat Commun 15: 8607-8607

Released	2024-07-24
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Mitogen-activated protein kinase 1 (protein) SynthRevD-12-opt (protein)
Unique Ligands	ANP, GOL

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8PST \| pdb_00008pst	Download File View File

ERK2 covelently bound to RU60 cyclohexenone based inhibitor

Sok, P., Poti, A., Remenyi, A., Gogl, G.

(2024) Nat Commun 15: 8607-8607

Released	2024-07-24
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 1 (protein)
Unique Ligands	AN2, DC6

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8PSW \| pdb_00008psw	Download File View File

ERK2 covalently bound to RU67 cyclohexenone based inhibitor

Sok, P., Poti, A., Remenyi, A., Gogl, G.

(2024) Nat Commun 15: 8607-8607

Released	2024-07-24
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 1 (protein)
Unique Ligands	AN2, D2I

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8PSY \| pdb_00008psy	Download File View File

ERK2 covelently bound to RU68 cyclohexenone based inhibitor

Sok, P., Poti, A., Remenyi, A., Gogl, G.

(2024) Nat Commun 15: 8607-8607

Released	2024-07-24
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 1 (protein)
Unique Ligands	AN2, EI0

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8PT0 \| pdb_00008pt0	Download File View File

ERK2 covelently bound to RU75 cyclohexenone based inhibitor

Sok, P., Poti, A., Remenyi, A., Gogl, G.

(2024) Nat Commun 15: 8607-8607

Released	2024-07-24
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 1 (protein)
Unique Ligands	ANP, EAI, GOL

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8PT1 \| pdb_00008pt1	Download File View File

ERK2 covelently bound to RU76 cyclohexenone based inhibitor

Sok, P., Poti, A., Remenyi, A., Gogl, G.

(2024) Nat Commun 15: 8607-8607

Released	2024-07-24
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 1 (protein)
Unique Ligands	ANP, E2A

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8PT3 \| pdb_00008pt3	Download File View File

ERK2 covelently bound to RU77 cyclohexenone based inhibitor

Sok, P., Poti, A., Remenyi, A.

(2024) Nat Commun 15: 8607-8607

Released	2024-07-24
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 1 (protein)
Unique Ligands	ANP, D7O, GOL

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8PT5 \| pdb_00008pt5	Download File View File

ERK2 covelently bound to RU187 cyclohexenone based inhibitor

Sok, P., Poti, A., Remenyi, A.

(2024) Nat Commun 15: 8607-8607

Released	2024-07-24
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 1 (protein)
Unique Ligands	ANP, D5R, GOL

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8PT8 \| pdb_00008pt8	Download File View File

JNK1 covalently bound to RU135 cyclohexenone based inhibitor

Sok, P., Poti, A., Remenyi, A.

(2024) Nat Commun 15: 8606-8606

Released	2024-07-24
Method	X-RAY DIFFRACTION 2.78 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 8 (protein)
Unique Ligands	A3O, GOL

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8PT9 \| pdb_00008pt9	Download File View File

JNK1 covalently bound to BD838 cyclohexenone based inhibitor

Sok, P., Poti, A., Remenyi, A.

(2024) Nat Commun 15: 8606-8606

Released	2024-07-24
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 8 (protein)
Unique Ligands	DVI

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8PTA \| pdb_00008pta	Download File View File

JNK1 covalently bound to BD837 cyclohexenone based inhibitor

Sok, P., Poti, A., Remenyi, A.

(2024) Nat Commun 15: 8606-8606

Released	2024-07-24
Method	X-RAY DIFFRACTION 2.41 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 8 (protein)
Unique Ligands	CIF, GOL

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8R58 \| pdb_00008r58	Download File View File

The RSK 2 N-terminal kinase domain in complex with BMF (1-19)

Sok, P., Remenyi, A.

To be published

Released	2024-11-27
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Homo sapiens
Macromolecule	Bcl-2-modifying factor (protein) Ribosomal protein S6 kinase alpha-3 (protein)
Unique Ligands	GOL, QCT

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8R5E \| pdb_00008r5e	Download File View File

JNK1 covalently bound to RU77 cyclohexenone based inhibitor

Sok, P., Poti, A., Remenyi, A.

To be published

Released	2024-11-27
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 8 (protein)
Unique Ligands	ANP, GOL, MG, Y6K

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8R5F \| pdb_00008r5f	Download File View File

ERK2 covalently bound to RU83 cyclohexenone based inhibitor

Sok, P., Poti, A., Remenyi, A.

To be published

Released	2024-11-27
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	Mitogen-activated protein kinase 1 (protein)
Unique Ligands	ANP, GOL, Y3H

1 to 21 of 21 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

6TCA | pdb_00006tca

6ZQS | pdb_00006zqs

7OPM | pdb_00007opm

7OPO | pdb_00007opo

7PPL | pdb_00007ppl

7PPM | pdb_00007ppm

7PPN | pdb_00007ppn

8PSR | pdb_00008psr

8PST | pdb_00008pst

8PSW | pdb_00008psw

8PSY | pdb_00008psy

8PT0 | pdb_00008pt0

8PT1 | pdb_00008pt1

8PT3 | pdb_00008pt3

8PT5 | pdb_00008pt5

8PT8 | pdb_00008pt8

8PT9 | pdb_00008pt9

8PTA | pdb_00008pta

8R58 | pdb_00008r58

8R5E | pdb_00008r5e

8R5F | pdb_00008r5f