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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Structural Genomics Consortium (SGC)"

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Search Summary

This query matches 2,441 Structures.

Refinements

Structure Determination Methodology

experimental (2,441)

Scientific Name of Source Organism

	Homo sapiens (2,020)
	Mus musculus (135)
	synthetic construct (79)
	Plasmodium falciparum 3D7 (47)
	Cryptosporidium parvum Iowa II (32)
	Toxoplasma gondii (27)
	Plasmodium falciparum (17)
	Escherichia coli K-12 (16)
	Cryptosporidium parvum (12)
	Plasmodium vivax (12)

More...

Taxonomy

	Eukaryota (2,398)
	other sequences (79)
	Bacteria (34)
	Eukaryota (eukaryotes) (16)
	Riboviria (14)
	Archaea (2)
	unclassified sequences (1)

Experimental Method

	X-RAY DIFFRACTION (2,380)
	SOLUTION NMR (36)
	ELECTRON MICROSCOPY (25)

Polymer Entity Type

	Protein (2,441)
	DNA (51)
	RNA (7)

Refinement Resolution (Å)

	1.0 - 1.5 (267)
	1.5 - 2.0 (944)
	2.0 - 2.5 (861)
	2.5 - 3.0 (275)
	3.0 - 3.5 (43)
	3.5 - 4.0 (12)
	4.0 - 4.5 (2)
	> 4.5 (1)

Release Date

	2000 - 2004 (5)
	2005 - 2009 (792)
	2010 - 2014 (538)
	2015 - 2019 (507)
	2020 - 2024 (582)
	2025 - 2029 (17)

Enzyme Classification Name

	Transferases (1,066)
	Hydrolases (271)
	Oxidoreductases (110)
	Ligases (99)
	Lyases (38)
	Isomerases (41)

Membrane Protein Annotation

	OPM (46)
	PDBTM (39)
	MemProtMD (25)
	mpstruc (20)

Symmetry Type

	Asymmetric (1,901)
	Cyclic (584)
	Dihedral (107)
	Tetrahedral (2)

SCOP Classification

	Alpha and beta proteins (a+b) (416)
	Artifacts (466)
	Alpha and beta proteins (a/b) (323)
	All alpha proteins (290)
	All beta proteins (184)
	Small proteins (13)
	Multi-domain proteins (alpha and beta) (8)
	Membrane and cell surface proteins and peptides (6)
	Coiled coil proteins (1)

AllSelected

1 to 25 of 2,441 Structures

Page 1 of 98

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1TXJ \| pdb_00001txj	Download File View File

Crystal structure of translationally controlled tumour-associated protein (TCTP) from Plasmodium knowlesi

Walker, J.R., Vedadi, M., Sharma, S., Houston, S., Lew, J., Amani, M., Wasney, G., Skarina, T., Bray, J., Sundstrom, M., Arrowsmith, C., Edwards, A., Hui, R., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2004-07-20
Method	X-RAY DIFFRACTION 2 Å
Organisms	Plasmodium knowlesi
Macromolecule	translationally controlled tumour-associated protein (TCTP) from Plasmodium knowlesi, PKN_PFE0545c (protein)

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1WZZ \| pdb_00001wzz	Download File View File

Structure of endo-beta-1,4-glucanase CMCax from Acetobacter xylinum

Yasutake, Y., Kawano, S., Tajima, K., Yao, M., Satoh, Y., Munekata, M., Tanaka, I., Structural Genomics Consortium (SGC)

(2006) Proteins 64: 1069-1077

Released	2006-03-14
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Komagataeibacter xylinus
Macromolecule	Probable endoglucanase (protein)
Unique Ligands	SO4

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1XCC \| pdb_00001xcc	Download File View File

1-Cys peroxidoxin from Plasmodium Yoelli

Vedadi, M., Sharma, S., Houston, S., Lew, J., Wasney, G., Amani, M., Xu, X., Bray, J., Sundstrom, M., Arrowsmith, C., Edwards, A., Hui, R., Bochkarev, A., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2004-11-09
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Plasmodium yoelii
Macromolecule	1-Cys peroxiredoxin (protein)

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1XG5 \| pdb_00001xg5	Download File View File

Structure of human putative dehydrogenase MGC4172 in complex with NADP

Kavanagh, K., Ng, S., Sharma, S., Vedadi, M., von Delft, F., Walker, J.R., dhe Paganon, S., Bray, J., Oppermann, U., Edwards, A., Arrowsmith, C., Sundstrom, M., Structural Genomics Consortium (SGC)

To be published

Released	2004-10-05
Method	X-RAY DIFFRACTION 1.53 Å
Organisms	Homo sapiens
Macromolecule	ARPG836 (protein)
Unique Ligands	ACY, NAP

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1Y6L \| pdb_00001y6l	Download File View File

Human ubiquitin conjugating enzyme E2E2

Walker, J.R., Avvakumov, G.V., Newman, E.M., Mackenzie, F., Kozieradzki, I., Bochkarev, A., Sundstrom, M., Arrowsmith, C., Edwards, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)

(2012) Mol Cell Proteomics 11: 329-341

Released	2005-01-11
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	Ubiquitin-conjugating enzyme E2E2 (protein)

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1Y6Z \| pdb_00001y6z	Download File View File

Middle domain of Plasmodium falciparum putative heat shock protein PF14_0417

Lunin, V.V., Botchkareva, E., Loppnau, P., Amani, M., Bray, J., Vedadi, M., Edwards, A., Arrowsmith, C., Sundstrom, M., Bochkarev, A., Hui, R., Plotnikova, O., Structural Genomics Consortium (SGC)

(2007) Mol Biochem Parasitol 151: 100-110

Released	2005-02-08
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	heat shock protein, putative (protein)

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1YB1 \| pdb_00001yb1	Download File View File

Crystal structure of human 17-beta-hydroxysteroid dehydrogenase type XI

Lukacik, P., Bunkoczi, G., Kavanagh, K., Ng, S., von Delft, F., Bray, J., Edwards, A., Arrowsmith, C., Sundstrom, M., Oppermann, U., Structural Genomics Consortium (SGC)

To be published

Released	2004-12-28
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	17-beta-hydroxysteroid dehydrogenase type XI (protein)
Unique Ligands	AOI, CL, GOL, SO4

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1YB5 \| pdb_00001yb5	Download File View File

Crystal structure of human Zeta-Crystallin with bound NADP

Debreczeni, J., Berridge, G., Kavanagh, K., Colbrook, S., Bray, J., Williams, L., Oppermann, U., Sundstrom, M., Arrowsmith, C., Edwards, A., Gileadi, O., von Delft, F., Structural Genomics Consortium (SGC)

To be published

Released	2004-12-28
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	Quinone oxidoreductase (protein)
Unique Ligands	ACT, CL, GOL, NAP

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1YDE \| pdb_00001yde	Download File View File

Crystal Structure of Human Retinal Short-Chain Dehydrogenase/Reductase 3

Lukacik, P., Bunkozci, G., Kavanagh, K., Sundstrom, M., Arrowsmith, C., Edwards, A., von Delft, F., Oppermann, U., Structural Genomics Consortium (SGC)

(2007) Biochem J 402: 419-427

Released	2005-01-18
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Retinal dehydrogenase/reductase 3 (protein)

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1YH2 \| pdb_00001yh2	Download File View File

Ubiquitin-Conjugating Enzyme HSPC150

Walker, J.R., Avvakumov, G.V., Newman, E.M., Mackenzie, F., Kozieradzki, I., Sundstrom, M., Arrowsmith, C., Edwards, A., Bochkarev, A., Dhe-paganon, S., Structural Genomics Consortium (SGC)

(2012) Mol Cell Proteomics 11: 329-341

Released	2005-02-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	HSPC150 protein similar to ubiquitin-conjugating enzyme (protein)

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1YLA \| pdb_00001yla	Download File View File

Ubiquitin-conjugating enzyme E2-25 kDa (Huntington interacting protein 2)

Choe, J., Avvakumov, G.V., Newman, E.M., Mackenzie, F., Kozieradzki, I., Bochkarev, A., Sundstrom, M., Arrowsmith, C., Edwards, A., Dhe-paganon, S., Structural Genomics Consortium (SGC)

(2010) J Biological Chem 285: 36070-36080

Released	2005-02-01
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Ubiquitin-conjugating enzyme E2-25 kDa (protein)

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1YQ7 \| pdb_00001yq7	Download File View File

Human farnesyl diphosphate synthase complexed with risedronate

Kavanagh, K.L., Guo, K., Von delft, F., Arrowsmith, C., Sundstrom, M., Edwards, A., Oppermann, U., Structural Genomics Consortium (SGC)

To be published

Released	2005-02-22
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthetase (protein)
Unique Ligands	MG, PO4, RIS

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1YQB \| pdb_00001yqb	Download File View File

Human Ubiquilin 3

Walker, J.R., Xue, S., Avvakumov, G.V., Newman, E.M., Mackenzie, F., Sundstrom, M., Arrowsmith, C., Edwards, A., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)

To be published

Released	2005-02-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Ubiquilin 3 (protein)

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1YRV \| pdb_00001yrv	Download File View File

Novel Ubiquitin-Conjugating Enzyme

Walker, J.R., Choe, J., Avvakumov, G.V., Newman, E.M., MacKenzie, F., Sundstrom, M., Arrowsmith, C., Edwards, A., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)

(2012) Mol Cell Proteomics 11: 329-341

Released	2005-03-22
Method	X-RAY DIFFRACTION 2.18 Å
Organisms	Homo sapiens
Macromolecule	ubiquitin-conjugating ligase MGC351130 (protein)

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1YV5 \| pdb_00001yv5	Download File View File

Human farnesyl diphosphate synthase complexed with Mg and risedronate

Kavanagh, K.L., Guo, K., Von Delft, F., Arrowsmith, C., Sundstrom, M., Edwards, A., Oppermann, U., Structural Genomics Consortium (SGC)

(2006) Proc Natl Acad Sci U S A 103: 7829-7834

Released	2005-03-01
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthetase (protein)
Unique Ligands	MG, PO4, RIS

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1YXM \| pdb_00001yxm	Download File View File

Crystal structure of peroxisomal trans 2-enoyl CoA reductase

Jansson, A., Ng, S., Arrowsmith, C., Sharma, S., Edwards, A.M., Von Delft, F., Sundstrom, M., Oppermann, U., Structural Genomics Consortium (SGC)

To be published

Released	2005-03-15
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	peroxisomal trans 2-enoyl CoA reductase (protein)
Unique Ligands	ADE, PO4, SO4

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1YZG \| pdb_00001yzg	Download File View File

Structure of Human ADP-ribosylation factor-like 8

Choe, J., Atanassova, A., Arrowsmith, C., Edwards, A., Sundstrom, M., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)

(2005) To be published

Released	2005-03-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	ADP-ribosylation factor-like 8 (protein)
Unique Ligands	GDP

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1Z4R \| pdb_00001z4r	Download File View File

Human GCN5 Acetyltransferase

Dong, A., Bernstein, G., Schuetz, A., Antoshenko, T., Wu, H., Loppnau, P., Sundstrom, M., Arrowsmith, C., Edwards, A., Bochkarev, A., Plotnikov, A., Structural Genomics Consortium (SGC)

(2007) Proteins 68: 403-407

Released	2005-03-29
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Homo sapiens
Macromolecule	General control of amino acid synthesis protein 5-like 2 (protein)
Unique Ligands	ACO