RCSB PDB: Search

6WIQ \| pdb_00006wiq	Download File View File

Crystal structure of the co-factor complex of NSP7 and the C-terminal domain of NSP8 from SARS CoV-2

Wilamowski, M., Kim, Y., Jedrzejczak, R., Maltseva, N., Endres, M., Godzik, A., Michalska, K., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2021) Biophys J 120: 3152-3165

Released	2020-04-22
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Non-structural protein 7 (protein) Non-structural protein 8 (protein)

Explore in 3D

6WQD \| pdb_00006wqd	Download File View File

The 1.95 A Crystal Structure of the Co-factor Complex of NSP7 and the C-terminal Domain of NSP8 from SARS-CoV-2

Kim, Y., Wilamowski, M., Jedrzejczak, R., Maltseva, N., Endres, M., Godzik, A., Michalska, K., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2021) Biophys J 120: 3152-3165

Released	2020-05-06
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Non-structural protein 7 (protein) Non-structural protein 8 (protein)
Unique Ligands	EDO

Explore in 3D

6WTC \| pdb_00006wtc	Download File View File

Crystal Structure of the Second Form of the Co-factor Complex of NSP7 and the C-terminal Domain of NSP8 from SARS CoV-2

Wilamowski, M., Kim, Y., Jedrzejczak, R., Maltseva, N., Endres, M., Godzik, A., Michalska, K., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2020-05-13
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Non-structural protein 7 (protein) Non-structural protein 8 (protein)
Unique Ligands	ACY

Explore in 3D

6XIP \| pdb_00006xip	Download File View File

The 1.5 A Crystal Structure of the Co-factor Complex of NSP7 and the C-terminal Domain of NSP8 from SARS CoV-2

Wilamowski, M., Kim, Y., Jedrzejczak, R., Maltseva, N., Endres, M., Godzik, A., Michalska, K., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2021) Biophys J 120: 3152-3165

Released	2020-07-01
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Non-structural protein 7 (protein) Non-structural protein 8 (protein)
Unique Ligands	EDO

Explore in 3D

6XKM \| pdb_00006xkm	Download File View File

Room Temperature Structure of SARS-CoV-2 NSP10/NSP16 Methyltransferase in a Complex with SAM Determined by Fixed-Target Serial Crystallography

Wilamowski, M., Sherrell, D.A., Minasov, G., Kim, Y., Shuvalova, L., Lavens, A., Chard, R., Rosas-Lemus, M., Maltseva, N., Jedrzejczak, R., Michalska, K., Satchell, K.J.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2021) Proc Natl Acad Sci U S A 118:

Released	2020-07-08
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	2'-O-methyltransferase (protein) Non-structural protein 10 (protein)
Unique Ligands	CL, SAM, ZN

Explore in 3D

7JHE \| pdb_00007jhe	Download File View File

Room Temperature Structure of SARS-CoV-2 Nsp10/Nsp16 Methyltransferase in a Complex with 2'-O-methylated m7GpppA Cap-1 and SAH Determined by Fixed-Target Serial Crystallography

Wilamowski, M., Sherrell, D.A., Minasov, G., Kim, Y., Shuvalova, L., Lavens, A., Chard, R., Rosas-Lemus, M., Maltseva, N., Jedrzejczak, R., Michalska, K., Satchell, K.J.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2021) Proc Natl Acad Sci U S A 118:

Released	2020-08-26
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	2'-O-methyltransferase (protein) Non-structural protein 10 (protein)
Unique Ligands	CL, MGP, SAH, V9G, ZN

Explore in 3D

7JIB \| pdb_00007jib	Download File View File

Room Temperature Crystal Structure of Nsp10/Nsp16 from SARS-CoV-2 with Substrates and Products of 2'-O-methylation of the Cap-1

Wilamowski, M., Minasov, G., Kim, Y., Sherrell, D.A., Shuvalova, L., Lavens, A., Chard, R., Rosas-Lemus, M., Maltseva, N., Jedrzejczak, R., Michalska, K., Satchell, K.J.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2021) Proc Natl Acad Sci U S A 118:

Released	2020-08-26
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	2'-O-methyltransferase (protein) Non-structural protein 10 (protein)
Unique Ligands	CL, GTA, MGP, SAH, SAM, V9G, ZN

Explore in 3D

7JPE \| pdb_00007jpe	Download File View File

Room Temperature Structure of SARS-CoV-2 Nsp10/Nsp16 Methyltransferase in a Complex with m7GpppA Cap-0 and SAM Determined by Fixed-Target Serial Crystallography

Wilamowski, M., Sherrell, D.A., Minasov, G., Kim, Y., Shuvalova, L., Lavens, A., Chard, R., Rosas-Lemus, M., Maltseva, N., Jedrzejczak, R., Michalska, K., Satchell, K.J.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2021) Proc Natl Acad Sci U S A 118:

Released	2020-08-26
Method	X-RAY DIFFRACTION 2.18 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	2'-O-methyltransferase (protein) Non-structural protein 10 (protein)
Unique Ligands	GTA, M7G, SAM, ZN

Explore in 3D

7KOA \| pdb_00007koa	Download File View File

Room Temperature Structure of SARS-CoV-2 Nsp10/16 Methyltransferase in a Complex with Cap-0 and SAM Determined by Pink-Beam Serial Crystallography

Wilamowski, M., Sherrell, D.A., Minasov, G., Shuvalova, L., Lavens, A., Henning, R., Maltseva, N., Rosas-Lemus, M., Kim, Y., Satchell, K.J.F., Srajer, V., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2020-11-18
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	2'-O-methyltransferase (protein) Non-structural protein 10 (protein)
Unique Ligands	GTA, SAM, ZN

Explore in 3D

7L52 \| pdb_00007l52	Download File View File

Crystal Structure of the Metallo Beta Lactamase L1 from Stenotrophomonas maltophilia Determined by Serial Crystallography

Wilamowski, M., Kim, Y., Sherrell, D.A., Lavens, A., Maltseva, N., Endres, M., Babnigg, G., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2020-12-30
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Stenotrophomonas maltophilia K279a
Macromolecule	Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase) (protein)
Unique Ligands	ZN

Explore in 3D

7L91 \| pdb_00007l91	Download File View File

Structure of Metallo Beta-Lactamase L1 in a Complex with Hydrolyzed Moxalactam Determined by Pink-Beam Serial Crystallography

Wilamowski, M., Kim, Y., Sherrell, D.A., Lavens, A., Henning, R., Maltseva, N., Endres, M., Babnigg, G., Vukica, S., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Nat Commun 13: 7379-7379

Released	2022-02-09
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Stenotrophomonas maltophilia K279a
Macromolecule	Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase) (protein)
Unique Ligands	XQP, ZN

Explore in 3D

7UHH \| pdb_00007uhh	Download File View File

Time-Resolved Structure of Metallo Beta-Lactamase L1 in a Complex with Non-Hydrolyzed Moxalactam (20 ms snapshot)

Wilamowski, M., Kim, Y., Sherrell, D.A., Lavens, A., Henning, R., Maltseva, N., Endres, M., Babnigg, G., Srajer, V., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Nat Commun 13: 7379-7379

Released	2022-04-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Stenotrophomonas maltophilia K279a
Macromolecule	Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase) (protein)
Unique Ligands	MX0, ZN

Explore in 3D

7UHI \| pdb_00007uhi	Download File View File

Time-Resolved Structure of Metallo Beta-Lactamase L1 in a Complex with Non-Hydrolyzed Moxalactam (40 ms Snapshot)

Wilamowski, M., Kim, Y., Sherrell, D.A., Lavens, A., Henning, R., Maltseva, N., Endres, M., Babnigg, G., Srajer, V., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Nat Commun 13: 7379-7379

Released	2022-04-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Stenotrophomonas maltophilia K279a
Macromolecule	Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase) (protein)
Unique Ligands	MX0, ZN

Explore in 3D

7UHJ \| pdb_00007uhj	Download File View File

Time-Resolved Structure of Metallo Beta-Lactamase L1 in a Complex with Non-Hydrolyzed Moxalactam (60 ms Snapshot)

Wilamowski, M., Kim, Y., Sherrell, D.A., Lavens, A., Henning, R., Maltseva, N., Endres, M., Babnigg, G., Srajer, V., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Nat Commun 13: 7379-7379

Released	2022-04-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Stenotrophomonas maltophilia K279a
Macromolecule	Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase) (protein)
Unique Ligands	MX0, ZN

Explore in 3D

7UHK \| pdb_00007uhk	Download File View File

Time-Resolved Structure of Metallo Beta-Lactamase L1 in a Complex with Non-Hydrolyzed Moxalactam (80 ms Snapshot)

Wilamowski, M., Kim, Y., Sherrell, D.A., Lavens, A., Henning, R., Maltseva, N., Endres, M., Babnigg, G., Srajer, V., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Nat Commun 13: 7379-7379

Released	2022-04-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Stenotrophomonas maltophilia K279a
Macromolecule	Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase) (protein)
Unique Ligands	MX0, ZN

Explore in 3D

7UHL \| pdb_00007uhl	Download File View File

Time-Resolved Structure of Metallo Beta-Lactamase L1 in a Complex with Non-Hydrolyzed Moxalactam (100 ms Snapshot)

Wilamowski, M., Kim, Y., Sherrell, D.A., Lavens, A., Henning, R., Maltseva, N., Endres, M., Babnigg, G., Srajer, V., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Nat Commun 13: 7379-7379

Released	2022-04-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Stenotrophomonas maltophilia K279a
Macromolecule	Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase) (protein)
Unique Ligands	MX0, ZN

Explore in 3D

7UHM \| pdb_00007uhm	Download File View File

Time-Resolved Structure of Metallo Beta-Lactamase L1 in a Complex with Cleaved Moxalactam (150 ms Snapshot)

Wilamowski, M., Kim, Y., Sherrell, D.A., Lavens, A., Henning, R., Maltseva, N., Endres, M., Babnigg, G., Srajer, V., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Nat Commun 13: 7379-7379

Released	2022-06-29
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Stenotrophomonas maltophilia K279a
Macromolecule	Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase) (protein)
Unique Ligands	XQP, ZN

Explore in 3D

7UHN \| pdb_00007uhn	Download File View File

Time-Resolved Structure of Metallo Beta-Lactamase L1 in a Complex with Cleaved Moxalactam (300 ms Snapshot)

Wilamowski, M., Kim, Y., Sherrell, D.A., Lavens, A., Henning, R., Maltseva, N., Endres, M., Babnigg, G., Srajer, V., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Nat Commun 13: 7379-7379

Released	2022-04-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Stenotrophomonas maltophilia K279a
Macromolecule	Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase) (protein)
Unique Ligands	XQP, ZN

Explore in 3D

7UHO \| pdb_00007uho	Download File View File

Time-Resolved Structure of Metallo Beta-Lactamase L1 in a Complex with Cleaved Moxalactam (500 ms Snapshot)

Wilamowski, M., Kim, Y., Sherrell, D.A., Lavens, A., Henning, R., Maltseva, N., Endres, M., Babnigg, G., Srajer, V., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Nat Commun 13: 7379-7379

Released	2022-07-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Stenotrophomonas maltophilia K279a
Macromolecule	Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase) (protein)
Unique Ligands	XQP, ZN

Explore in 3D

7UHP \| pdb_00007uhp	Download File View File

Time-Resolved Structure of Metallo Beta-Lactamase L1 in a Complex with Cleaved Moxalactam (2000 ms Snapshot)

Wilamowski, M., Kim, Y., Sherrell, D.A., Lavens, A., Henning, R., Maltseva, N., Endres, M., Babnigg, G., Srajer, V., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Nat Commun 13: 7379-7379

Released	2022-04-13
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Stenotrophomonas maltophilia K279a
Macromolecule	Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase) (protein)
Unique Ligands	XQP, ZN

Explore in 3D

7UHQ \| pdb_00007uhq	Download File View File

Time-Resolved Structure of Metallo Beta-Lactamase L1 in a Complex with Cleaved Moxalactam (4000 ms Snapshot)

Wilamowski, M., Kim, Y., Sherrell, D.A., Lavens, A., Henning, R., Maltseva, N., Endres, M., Babnigg, G., Srajer, V., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Nat Commun 13: 7379-7379

Released	2022-04-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Stenotrophomonas maltophilia K279a
Macromolecule	Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase) (protein)
Unique Ligands	XQP, ZN

Explore in 3D

7UHR \| pdb_00007uhr	Download File View File

Time-Resolved Structure of Metallo Beta-Lactamase L1 Before Reaction (Dark-Set)

Wilamowski, M., Kim, Y., Sherrell, D.A., Lavens, A., Henning, R., Maltseva, N., Endres, M., Babnigg, G., Srajer, V., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Nat Commun 13: 7379-7379

Released	2022-04-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Stenotrophomonas maltophilia K279a
Macromolecule	Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase) (protein)
Unique Ligands	ZN

Explore in 3D

7UHS \| pdb_00007uhs	Download File View File

SSX Structure of Metallo Beta-Lactamase L1 with Two Water Molecules in the Active Site

Wilamowski, M., Kim, Y., Sherrell, D.A., Lavens, A., Henning, R., Maltseva, N., Endres, M., Babnigg, G., Srajer, V., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Nat Commun 13: 7379-7379

Released	2022-04-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Stenotrophomonas maltophilia K279a
Macromolecule	Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase) (protein)

Explore in 3D

7UHT \| pdb_00007uht	Download File View File

SSX Structure of Metallo Beta-Lactamase L1 with One Zinc in the Active Site

Wilamowski, M., Kim, Y., Sherrell, D.A., Lavens, A., Henning, R., Maltseva, N., Endres, M., Babnigg, G., Srajer, V., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

(2022) Nat Commun 13: 7379-7379

Released	2022-04-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Stenotrophomonas maltophilia K279a
Macromolecule	Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase) (protein)
Unique Ligands	ZN

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

6WIQ | pdb_00006wiq

6WQD | pdb_00006wqd

6WTC | pdb_00006wtc

6XIP | pdb_00006xip

6XKM | pdb_00006xkm

7JHE | pdb_00007jhe

7JIB | pdb_00007jib

7JPE | pdb_00007jpe

7KOA | pdb_00007koa

7L52 | pdb_00007l52

7L91 | pdb_00007l91

7UHH | pdb_00007uhh

7UHI | pdb_00007uhi

7UHJ | pdb_00007uhj

7UHK | pdb_00007uhk

7UHL | pdb_00007uhl

7UHM | pdb_00007uhm

7UHN | pdb_00007uhn

7UHO | pdb_00007uho

7UHP | pdb_00007uhp

7UHQ | pdb_00007uhq

7UHR | pdb_00007uhr

7UHS | pdb_00007uhs

7UHT | pdb_00007uht