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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Bennett, E.M."

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Search Summary

This query matches 25 Structures.

Refinements

Structure Determination Methodology

experimental (25)

Scientific Name of Source Organism

	Escherichia coli O157:H7 (9)
	Escherichia coli (7)
	Bacillus subtilis (3)
	Homo sapiens (3)
	Salmonella enterica subsp. enterica serovar Typhimurium (2)
	Rattus norvegicus (1)
	Solanum tuberosum (1)

Taxonomy

	Bacteria (21)
	Eukaryota (4)

Experimental Method

X-RAY DIFFRACTION (25)

Polymer Entity Type

Protein (25)

Refinement Resolution (Å)

	1.5 - 2.0 (2)
	2.0 - 2.5 (15)
	2.5 - 3.0 (8)

Release Date

	2000 - 2004 (23)
	2010 - 2014 (1)
	2020 - 2024 (1)

Enzyme Classification Name

	Transferases (19)
	Lyases (3)
	Ligases (2)
	Hydrolases (1)

Symmetry Type

	Dihedral (17)
	Asymmetric (4)
	Cyclic (4)

SCOP Classification

	Alpha and beta proteins (a/b) (19)
	Alpha and beta proteins (a+b) (5)
	All beta proteins (2)
	All alpha proteins (1)

AllSelected

1 to 25 of 25 Structures

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1JXH \| pdb_00001jxh	Download File View File

4-Amino-5-hydroxymethyl-2-methylpyrimidine Phosphate Kinase from Salmonella typhimurium

Cheng, G., Bennett, E.M., Begley, T.P., Ealick, S.E.

(2002) Structure 10: 225-235

Released	2002-02-27
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	PHOSPHOMETHYLPYRIMIDINE KINASE (protein)
Unique Ligands	SO4

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1JXI \| pdb_00001jxi	Download File View File

4-Amino-5-hydroxymethyl-2-methylpyrimidine Phosphate Kinase from Salmonella typhimurium complexed with 4-Amino-5-hydroxymethyl-2-methylpyrimidine

Cheng, G., Bennett, E.M., Begley, T.P., Ealick, S.E.

(2002) Structure 10: 225-235

Released	2002-02-27
Method	X-RAY DIFFRACTION 2.64 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	PHOSPHOMETHYLPYRIMIDINE KINASE (protein)
Unique Ligands	HMH, SO4

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1MHM \| pdb_00001mhm	Download File View File

Crystal structure of S-adenosylmethionine decarboxylase from potato

Bennett, E.M., Ekstrom, J.L., Pegg, A.E., Ealick, S.E.

(2002) Biochemistry 41: 14509-14517

Released	2002-12-11
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Solanum tuberosum
Macromolecule	S-adenosylmethionine decarboxylase (protein)

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1MSV \| pdb_00001msv	Download File View File

The S68A S-adenosylmethionine decarboxylase proenzyme processing mutant.

Tolbert, W.D., Zhang, Y., Bennett, E.M., Cottet, S.E., Ekstrom, J.L., Pegg, A.E., Ealick, S.E.

(2003) Biochemistry 42: 2386-2395

Released	2003-03-11
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	S-adenosylmethionine decarboxylase proenzyme (protein)
Unique Ligands	PUT, TRS

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1OTX \| pdb_00001otx	Download File View File

Purine Nucleoside Phosphorylase M64V mutant

Ealick, S.E., Bennett, E.M., Anand, R., Secrist, J.A., Parker, W.B., Hassan, A.E., Allan, P.W., McPherson, D.T., Sorscher, E.J.

(2003) Chem Biol 10: 1173-1181

Released	2004-02-17
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Escherichia coli
Macromolecule	Purine nucleoside phosphorylase (protein)
Unique Ligands	PO4

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1OTY \| pdb_00001oty	Download File View File

Native PNP +ALLO

Ealick, S.E., Bennett, E.M., Anand, R., Secrist, J.A., Parker, W.B., Hassan, A.E., Allan, P.W., McPherson, D.T., Sorscher, E.J.

(2003) Chem Biol 10: 1173-1181

Released	2004-02-17
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	Purine nucleoside phosphorylase (protein)
Unique Ligands	6MP, PO4

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1OU4 \| pdb_00001ou4	Download File View File

Native PNP +Talo

Ealick, S.E., Bennett, E.M., Anand, R., Secrist, J.A., Parker, W.B., Hassan, A.E., Allan, P.W., McPherson, D.T., Sorscher, E.J.

(2003) Chem Biol 10: 1173-1181

Released	2004-02-17
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	Purine nucleoside phosphorylase (protein)
Unique Ligands	6MP, PO4

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1OUM \| pdb_00001oum	Download File View File

M64V PNP +Talo

Ealick, S.E., Bennett, E.M., Anand, R., Secrist, J.A., Parker, W.B., Hassan, A.E., Allan, P.W., McPherson, D.T., Sorscher, E.J.

(2003) Chem Biol 10: 1173-1181

Released	2004-02-17
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	Purine nucleoside phosphorylase (protein)
Unique Ligands	PO4, TAL

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1OV6 \| pdb_00001ov6	Download File View File

M64V PNP + ALLO

Ealick, S.E., Bennett, E.M., Anand, R., Secrist, J.A., Parker, P.W., Hassan, A.E., Allan, P.W., McPherson, D.T., Sorscher, E.J.

(2003) Chem Biol 10: 1173-1181

Released	2004-02-17
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	Purine nucleoside phosphorylase (protein)
Unique Ligands	DBM, PO4

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1OVG \| pdb_00001ovg	Download File View File

M64V PNP +MePdr

Ealick, S.E., Bennett, E.M., Anand, R., Secrist, J.A., Parker, P.W., Hassan, A.E., Allan, P.W., McPherson, D.T., Sorscher, E.J.

(2003) Chem Biol 10: 1173-1181

Released	2004-02-17
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	Purine nucleoside phosphorylase (protein)
Unique Ligands	MDR, PO4

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1PK7 \| pdb_00001pk7	Download File View File

Crystal Structure of E. coli purine nucleoside phosphorylase complexed with adenosine and sulfate/phosphate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	ADN, PO4

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1PK9 \| pdb_00001pk9	Download File View File

Crystal Structure of E. coli purine nucleoside phosphorylase complexed with 2-fluoroadenosine and sulfate/phosphate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	2FA, PO4

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1PKE \| pdb_00001pke	Download File View File

Crystal Structure of E. coli purine nucleoside phosphorylase complexed with 2-fluoro-2'-deoxyadenosine and sulfate/phosphate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	2FD, PO4

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1PR0 \| pdb_00001pr0	Download File View File

Escherichia coli Purine Nucleoside Phosphorylase Complexed with Inosine and Phosphate/Sulfate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	NOS, PO4

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1PR1 \| pdb_00001pr1	Download File View File

Escherichia coli Purine Nucleoside Phosphorylase Complexed with Formycin B and Phosphate/Sulfate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	Purine nucleoside phosphorylase (protein)
Unique Ligands	FMB, PO4

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1PR2 \| pdb_00001pr2	Download File View File

Escherichia coli Purine Nucleoside Phosphorylase Complexed with 9-beta-D-[2-deoxyribofuranosyl]-6-methylpurine and Phosphate/Sulfate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	MDR, PO4

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1PR4 \| pdb_00001pr4	Download File View File

Escherichia coli Purine Nucleoside Phosphorylase Complexed with 9-beta-D-ribofuranosyl-6-methylthiopurine and Phosphate/Sulfate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	MTP, PO4

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1PR5 \| pdb_00001pr5	Download File View File

Escherichia coli Purine Nucleoside Phosphorylase Complexed with 7-deazaadenosine and Phosphate/Sulfate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	PO4, TBN

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1PR6 \| pdb_00001pr6	Download File View File

Escherichia coli Purine Nucleoside Phosphorylase Complexed with 9-beta-D-xylofuranosyladenine and Phosphate/Sulfate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	PO4, XYA

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1PW7 \| pdb_00001pw7	Download File View File

Crystal Structure of E. coli purine nucleoside phosphorylase complexed with 9-beta-D-arabinofuranosyladenine and sulfate/phosphate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	PO4, RAB

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1R9G \| pdb_00001r9g	Download File View File

Three-dimensional Structure of YaaE from Bacillus subtilis

Bauer, J.A., Bennett, E.M., Begley, T.P., Ealick, S.E.

(2004) J Biological Chem 279: 2704-2711

Released	2004-01-27
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Bacillus subtilis
Macromolecule	Hypothetical protein yaaE (protein)

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1T4A \| pdb_00001t4a	Download File View File

Structure of B. Subtilis PurS C2 Crystal Form

Anand, R., Hoskins, A.A., Bennett, E.M., Sintchak, M.D., Stubbe, J., Ealick, S.E.

(2004) Biochemistry 43: 10343-10352

Released	2004-09-14
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bacillus subtilis
Macromolecule	PurS (protein)

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1TWJ \| pdb_00001twj	Download File View File

Crystal Structure of B. subtilis PurS P21 Crystal Form

Anand, R., Ealick, S.E., Hoskins, A.A., Stubbe, J.

(2004) Biochemistry 43: 10343-10352

Released	2004-08-31
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Bacillus subtilis
Macromolecule	Hypothetical UPF0062 protein yexA (protein)

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4FUL \| pdb_00004ful	Download File View File

PI3 Kinase Gamma bound to a pyrmidine inhibitor

Gopalsamy, A., Bennett, E.M., Shi, M., Zhang, W.G., Bard, J., Yu, K.

(2012) Bioorg Med Chem Lett 22: 6636-6641

Released	2012-10-17
Method	X-RAY DIFFRACTION 2.47 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform (protein)
Unique Ligands	0VU

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7KQ7 \| pdb_00007kq7	Download File View File

Crystal structure of IL21R in complex with an antibody Fab fragment

Mosyak, L., Svenson, K.

(2021) MAbs 13: 1883239-1883239

Released	2021-04-07
Method	X-RAY DIFFRACTION 2.203 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	Antibody heavy chain (protein) Antibody light chain (protein) Interleukin-21 receptor (protein)

1 to 25 of 25 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1JXH | pdb_00001jxh

1JXI | pdb_00001jxi

1MHM | pdb_00001mhm

1MSV | pdb_00001msv

1OTX | pdb_00001otx

1OTY | pdb_00001oty

1OU4 | pdb_00001ou4

1OUM | pdb_00001oum

1OV6 | pdb_00001ov6

1OVG | pdb_00001ovg

1PK7 | pdb_00001pk7

1PK9 | pdb_00001pk9

1PKE | pdb_00001pke

1PR0 | pdb_00001pr0

1PR1 | pdb_00001pr1

1PR2 | pdb_00001pr2

1PR4 | pdb_00001pr4

1PR5 | pdb_00001pr5

1PR6 | pdb_00001pr6

1PW7 | pdb_00001pw7

1R9G | pdb_00001r9g

1T4A | pdb_00001t4a

1TWJ | pdb_00001twj

4FUL | pdb_00004ful

7KQ7 | pdb_00007kq7