RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Citation Author = "Bueler, S.A."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 197 Structures.

Refinements

Structure Determination Methodology

experimental (197)

Scientific Name of Source Organism

	Severe acute respiratory syndrome coronavirus 2 (47)
	Escherichia coli (39)
	Klebsiella pneumoniae (26)
	Homo sapiens (22)
	Eubacterium ramulus (8)
	Bacteroides thetaiotaomicron (7)
	synthetic construct (5)
	Escherichia coli K-12 (4)
	Parengyodontium album (4)
	Suid alphaherpesvirus 1 (4)

More...

Taxonomy

	Bacteria (112)
	Riboviria (47)
	Eukaryota (32)
	Duplodnaviria (5)
	other sequences (5)
	Archaea (2)

Experimental Method

X-RAY DIFFRACTION (197)

Polymer Entity Type

	Protein (197)
	DNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (19)
	1.5 - 2.0 (111)
	2.0 - 2.5 (42)
	2.5 - 3.0 (18)
	3.0 - 3.5 (5)
	4.0 - 4.5 (2)

Release Date

	1990 - 1994 (2)
	1995 - 1999 (7)
	2000 - 2004 (2)
	2005 - 2009 (8)
	2010 - 2014 (43)
	2015 - 2019 (32)
	2020 - 2024 (103)

Enzyme Classification Name

	Hydrolases (119)
	Oxidoreductases (8)
	Isomerases (8)
	Transferases (2)
	Lyases (2)

Symmetry Type

	Asymmetric (76)
	Cyclic (111)
	Dihedral (10)

SCOP Classification

	All alpha proteins (46)
	All beta proteins (33)
	Artifacts (21)
	Alpha and beta proteins (a/b) (8)
	Alpha and beta proteins (a+b) (7)
	Low resolution protein structures (1)

AllSelected

1 to 25 of 197 Structures

Page 1 of 8

Sort by

Explore in 3D

1A6I \| pdb_00001a6i	Download File View File

TET REPRESSOR, CLASS D VARIANT

Orth, P., Cordes, F., Schnappinger, D., Hillen, W., Saenger, W., Hinrichs, W.

(1998) J Mol Biology 279: 439-447

Released	1999-03-02
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	TETRACYCLINE REPRESSOR PROTEIN CLASS D (protein)

Explore in 3D

1BJR \| pdb_00001bjr	Download File View File

COMPLEX FORMED BETWEEN PROTEOLYTICALLY GENERATED LACTOFERRIN FRAGMENT AND PROTEINASE K

Singh, T.P., Sharma, S., Karthikeyan, S., Betzel, C., Bhatia, K.L.

(1998) Proteins 33: 30-38

Released	1998-11-04
Method	X-RAY DIFFRACTION 2.44 Å
Organisms	Bubalus bubalis Parengyodontium album
Macromolecule	LACTOFERRIN (protein) PROTEINASE K (protein)
Unique Ligands	CA

Explore in 3D

1BJZ \| pdb_00001bjz	Download File View File

TETRACYCLINE CHELATED MG2+-ION INITIATES HELIX UNWINDING FOR TET REPRESSOR INDUCTION

Orth, P., Saenger, W., Hinrichs, W.

(1999) Biochemistry 38: 191-198

Released	1999-01-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	TETRACYCLINE REPRESSOR (protein)

Explore in 3D

1C51 \| pdb_00001c51	Download File View File

PHOTOSYNTHETIC REACTION CENTER AND CORE ANTENNA SYSTEM (TRIMERIC), ALPHA CARBON ONLY

Klukas, O., Schubert, W.D., Jordan, P., Krauss, N., Fromme, P., Witt, H.T., Saenger, W.

(1999) J Biological Chem 274: 7351-7360

Released	2000-03-31
Method	X-RAY DIFFRACTION 4 Å
Organisms	Synechococcus elongatus
Macromolecule	Unique protein chains: 8
Unique Ligands	CLA, PQN, SF4

Explore in 3D

1ORK \| pdb_00001ork	Download File View File

TET REPRESSOR, CLASS D IN COMPLEX WITH 9-(N,N-DIMETHYLGLYCYLAMIDO)-6-DEMETHYL-6-DEOXY-TETRACYCLINE

Orth, P., Schnappinger, D., Sum, P.-E., Ellestad, G.A., Hillen, W., Saenger, W., Hinrichs, W.

(1999) J Mol Biology 285: 455-461

Released	1999-06-15
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli
Macromolecule	TETRACYCLINE REPRESSOR (protein)
Unique Ligands	ATC, MG

Explore in 3D

1QPI \| pdb_00001qpi	Download File View File

CRYSTAL STRUCTURE OF TETRACYCLINE REPRESSOR/OPERATOR COMPLEX

Orth, P., Schnappinger, D., Hillen, W., Saenger, W., Hinrichs, W.

(2000) Nat Struct Biol 7: 215-219

Released	2000-02-28
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	PROTEIN (TETRACYCLINE REPRESSOR) (protein) DNA (5'-D(CPCPTPAPTPCPAPAPTPGPAPTPAPGPA)-3') (nucleic acid) DNA (5'-D(TPCPTPAPTPCPAPTPTPGPAPTPAPGPG)-3') (nucleic acid)
Unique Ligands	IMD

Explore in 3D

2FJ1 \| pdb_00002fj1	Download File View File

Crystal Structure Analysis of Tet Repressor (class D) in Complex with 7-Chlortetracycline-Nickel(II)

Orth, P., Saenger, W., Palm, G.J., Hinrichs, W.

(2008) J Biol Inorg Chem 13: 1097-1110

Released	2007-01-09
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	Tetracycline repressor protein class D (protein)
Unique Ligands	CL, CTC, NI

Explore in 3D

2JCG \| pdb_00002jcg	Download File View File

Apo form of the catabolite control protein A (ccpA) from bacillus megaterium, with the DNA binding domain

Singh, R.K., Panjikar, S., Palm, G.J., Hinrichs, W.

(2007) Acta Crystallogr Sect F Struct Biol Cryst Commun 63: 253

Released	2007-03-06
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Priestia megaterium
Macromolecule	GLUCOSE-RESISTANCE AMYLASE REGULATOR (protein)
Unique Ligands	CA

Explore in 3D

2JES \| pdb_00002jes	Download File View File

Portal protein (gp6) from bacteriophage SPP1

Lebedev, A.A., Krause, M.H., Isidro, A.L., Vagin, A.A., Orlova, E.V., Turner, J., Dodson, E.J., Tavares, P., Antson, A.A.

(2007) EMBO J 26: 1984

Released	2007-03-27
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Bacillus phage SPP1
Macromolecule	PORTAL PROTEIN (protein) UNIDENTIFIED FRAGMENT OF PORTAL PROTEIN (protein)
Unique Ligands	CA, HG

Explore in 3D

2O7O \| pdb_00002o7o	Download File View File

Crystal structure analysis of TetR(D) complex with doxycycline

Aleksandrov, A., Proft, J., Hinrichs, W.

(2007) Chembiochem 8: 675-685

Released	2007-05-15
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Escherichia coli
Macromolecule	Tetracycline repressor protein class D (protein)
Unique Ligands	CL, DXT, MG, SO4

Explore in 3D

2PKC \| pdb_00002pkc	Download File View File

CRYSTAL STRUCTURE OF CALCIUM-FREE PROTEINASE K AT 1.5 ANGSTROMS RESOLUTION

Mueller, A., Hinrichs, W., Wolf, W.M., Saenger, W.

(1994) J Biological Chem 269: 23108-23111

Released	1994-01-31
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Parengyodontium album
Macromolecule	PROTEINASE K (protein)
Unique Ligands	NA

Explore in 3D

2PPS \| pdb_00002pps	Download File View File

PHOTOSYNTHETIC REACTION CENTER AND CORE ANTENNA SYSTEM (TRIMERIC), ALPHA CARBON ONLY

Krauss, N., Schubert, W.-D., Klukas, O., Fromme, P., Witt, H.T., Saenger, W.

(1996) Nat Struct Biol 3: 965-973

Released	1998-05-27
Method	X-RAY DIFFRACTION 4 Å
Organisms	Synechococcus elongatus
Macromolecule	Unique protein chains: 6
Unique Ligands	CLA, PQN, SF4

Explore in 3D

2TCT \| pdb_00002tct	Download File View File

THE COMPLEX FORMED BETWEEN TET REPRESSOR AND TETRACYCLINE-MG2+ REVEALS MECHANISM OF ANTIBIOTIC RESISTANCE

Hinrichs, W., Kisker, C., Saenger, W.

(1995) J Mol Biology 247: 260-280

Released	1996-04-03
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli
Macromolecule	TETRACYCLINE REPRESSOR (protein)
Unique Ligands	CTC, MG

Explore in 3D

2TRT \| pdb_00002trt	Download File View File

TETRACYCLINE REPRESSOR CLASS D

Hinrichs, W., Kisker, C., Saenger, W.

(1994) Science 264: 418-420

Released	1996-06-20
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	TETRACYCLINE REPRESSOR CLASS D (protein)
Unique Ligands	MG, TAC

Explore in 3D

2VKE \| pdb_00002vke	Download File View File

Tet repressor class D complexed with cobalt and tetracycline

Palm, G.J., Hinrichs, W.

(2008) J Biol Inorg Chem 13: 1097

Released	2008-07-01
Method	X-RAY DIFFRACTION 1.62 Å
Organisms	Escherichia coli
Macromolecule	TETRACYCLINE REPRESSOR PROTEIN CLASS D (protein)
Unique Ligands	CL, CO, TAC

Explore in 3D

2VPR \| pdb_00002vpr	Download File View File

Tet repressor class H in complex with 5a,6- anhydrotetracycline-Mg

Schuldt, L., Palm, G., Hinrichs, W.

(2008) J Mol Biology 378: 896

Released	2008-03-11
Method	X-RAY DIFFRACTION 2.49 Å
Organisms	Pasteurella multocida
Macromolecule	TETRACYCLINE RESISTANCE REPRESSOR PROTEIN (protein)
Unique Ligands	MG, SO4, TDC

Explore in 3D

2W3T \| pdb_00002w3t	Download File View File

Chloro complex of the Ni-Form of E.coli deformylase

Ngo, Y.H.T., Palm, G.J., Hinrichs, W.

(2010) J Biol Inorg Chem 15: 195

Released	2009-12-15
Method	X-RAY DIFFRACTION 1.69 Å
Organisms	Escherichia coli K-12
Macromolecule	PEPTIDE DEFORMYLASE (protein)
Unique Ligands	CL, EOH, NI

Explore in 3D

2W3U \| pdb_00002w3u	Download File View File

formate complex of the Ni-Form of E.coli deformylase

Ngo, Y.H.T., Palm, G.J., Hinrichs, W.

(2010) J Biol Inorg Chem 15: 195

Released	2009-12-15
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Escherichia coli K-12
Macromolecule	PEPTIDE DEFORMYLASE (protein)
Unique Ligands	FMT, NI

Explore in 3D

2WQ5 \| pdb_00002wq5	Download File View File

Non-antibiotic properties of tetracyclines: structural basis for inhibition of secretory phospholipase A2.

Dalm, D., Palm, G.J., Hinrichs, W.

(2010) J Mol Biology 398: 83

Released	2010-03-23
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Naja naja
Macromolecule	PHOSPHOLIPASE A2, ACIDIC (protein)
Unique Ligands	CA, MIY, SO4

Explore in 3D

2X3A \| pdb_00002x3a	Download File View File

AsaP1 inactive mutant E294Q, an extracellular toxic zinc metalloendopeptidase

Bogdanovic, X., Palm, G.J., Singh, R.K., Hinrichs, W.

(2016) FEBS Lett 590: 3280

Released	2011-02-02
Method	X-RAY DIFFRACTION 2 Å
Organisms	Aeromonas salmonicida subsp. achromogenes
Macromolecule	TOXIC EXTRACELLULAR ENDOPEPTIDASE (protein)
Unique Ligands	GOL, MES, SO4, ZN

Explore in 3D

2X3B \| pdb_00002x3b	Download File View File

AsaP1 inactive mutant E294A, an extracellular toxic zinc metalloendopeptidase

Bogdanovic, X., Palm, G.J., Singh, R.K., Hinrichs, W.

(2016) FEBS Lett 590: 3280

Released	2011-02-02
Method	X-RAY DIFFRACTION 2.28 Å
Organisms	Aeromonas salmonicida subsp. achromogenes
Macromolecule	TOXIC EXTRACELLULAR ENDOPEPTIDASE (protein)
Unique Ligands	ZN

Explore in 3D

2X3C \| pdb_00002x3c	Download File View File

AsaP1 inactive mutant E294Q, an extracellular toxic zinc metalloendopeptidase

Bogdanovic, X., Palm, G.J., Singh, R.K., Hinrichs, W.

(2016) FEBS Lett 590: 3280

Released	2011-02-02
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	Aeromonas salmonicida subsp. achromogenes
Macromolecule	TOXIC EXTRACELLULAR ENDOPEPTIDASE (protein)
Unique Ligands	CL, GOL, SO4, ZN

Explore in 3D

2X6O \| pdb_00002x6o	Download File View File

Tet Repressor class D in complex with 7-chlor-2-cyano-iso- tetracycline

Volkers, G., Hinrichs, W.

(2011) J Med Chem 54: 5108

Released	2011-03-02
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	TETRACYCLINE REPRESSOR PROTEIN CLASS D (protein)
Unique Ligands	2TC, CL

Explore in 3D

2X9D \| pdb_00002x9d	Download File View File

Tet repressor (class D) in complex with iso-7-chlortetracycline

Volkers, G., Hinrichs, W.

(2011) J Med Chem 54: 5108

Released	2011-03-23
Method	X-RAY DIFFRACTION 2.34 Å
Organisms	Escherichia coli
Macromolecule	TETRACYCLINE REPRESSOR PROTEIN CLASS D (protein)
Unique Ligands	CL, ITC

Explore in 3D

2XB5 \| pdb_00002xb5	Download File View File

Tet repressor (class D) in complex with 7-Iodotetracycline

Kisker, C., Saenger, W., Hinrichs, W.

(1994) Science 264: 418-420

Released	2010-10-06
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	TETRACYCLINE REPRESSOR PROTEIN CLASS D (protein)
Unique Ligands	CL, I7T, MG

1 to 25 of 197 Structures

Page 1 of 8

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1A6I | pdb_00001a6i

1BJR | pdb_00001bjr

1BJZ | pdb_00001bjz

1C51 | pdb_00001c51

1ORK | pdb_00001ork

1QPI | pdb_00001qpi

2FJ1 | pdb_00002fj1

2JCG | pdb_00002jcg

2JES | pdb_00002jes

2O7O | pdb_00002o7o

2PKC | pdb_00002pkc

2PPS | pdb_00002pps

2TCT | pdb_00002tct

2TRT | pdb_00002trt

2VKE | pdb_00002vke

2VPR | pdb_00002vpr

2W3T | pdb_00002w3t

2W3U | pdb_00002w3u

2WQ5 | pdb_00002wq5

2X3A | pdb_00002x3a

2X3B | pdb_00002x3b

2X3C | pdb_00002x3c

2X6O | pdb_00002x6o

2X9D | pdb_00002x9d

2XB5 | pdb_00002xb5