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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Czyrko, J."

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Search Summary

This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Pseudomonas aeruginosa PAO1 (5)
	Thermotoga maritima MSB8 (2)
	Bradyrhizobium elkanii (1)
	Cytophaga hutchinsonii ATCC 33406 (1)
	synthetic construct (1)

Taxonomy

	Bacteria (9)
	other sequences (1)

Experimental Method

X-RAY DIFFRACTION (10)

Polymer Entity Type

Protein (10)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (6)
	2.0 - 2.5 (1)

Release Date

2015 - 2019 (10)

Enzyme Classification Name

Hydrolases (9)

Symmetry Type

	Dihedral (7)
	Cyclic (2)
	Helical (1)

AllSelected

1 to 10 of 10 Structures

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4Z1R \| pdb_00004z1r	Download File View File

Crystal structure of collagen-like peptide at 1.27 Angstrom resolution

Plonska-Brzezinska, M.E., Czyrko, J., Brus, D.M., Imierska, M., Brzezinski, K.

(2015) RSC Adv 5: 95443-95453

Released	2015-11-18
Method	X-RAY DIFFRACTION 1.27 Å
Organisms	synthetic construct
Macromolecule	Collagen-like peptide (protein)

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5TOV \| pdb_00005tov	Download File View File

Crystal structure of the inactive form of S-adenosyl-L-homocysteine hydrolase from Thermotoga maritima in binary complex with NADH

Czyrko, J., Brzezinski, K.

(2017) Int J Biol Macromol 104: 584-596

Released	2017-07-05
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Thermotoga maritima MSB8
Macromolecule	Adenosylhomocysteinase (protein)
Unique Ligands	CL, NAI

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5TOW \| pdb_00005tow	Download File View File

Crystal structure of the inactive form of S-adenosyl-L-homocysteine hydrolase from Thermotoga maritima in ternary complex with NADH and Adenosine

Czyrko, J., Brzezinski, K.

(2017) Int J Biol Macromol 104: 584-596

Released	2017-07-05
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Thermotoga maritima MSB8
Macromolecule	Adenosylhomocysteinase (protein)
Unique Ligands	ADN, CL, MPD, NAI

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6EXI \| pdb_00006exi	Download File View File

NAD-free crystal structure of S-adenosyl-L-homocysteine hydrolase from Bradyrhizobium elkanii complexed with adenosine

Manszewski, T., Jaskolski, M.

(2018) Front Microbiol 9: 505-505

Released	2018-09-19
Method	X-RAY DIFFRACTION 1.918 Å
Organisms	Bradyrhizobium elkanii
Macromolecule	Adenosylhomocysteinase (protein)
Unique Ligands	ADN, NA, PEG

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6F3M \| pdb_00006f3m	Download File View File

Crystal structure of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa complexed with adenosine, K+ and Zn2+ cations

Czyrko, J., Brzezinski, K.

(2018) Sci Rep 8: 11334-11334

Released	2018-08-08
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Adenosylhomocysteinase (protein)
Unique Ligands	ADN, GOL, K, NAD, PO4, ZN

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6F3N \| pdb_00006f3n	Download File View File

Crystal structure of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa cocrystallized with SAH in the presence of K+ and Zn2+ cations

Czyrko, J., Brzezinski, K.

(2018) Sci Rep 8: 11334-11334

Released	2018-08-08
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Adenosylhomocysteinase (protein)
Unique Ligands	ADN, GOL, K, NAD, PO4, ZN

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6F3O \| pdb_00006f3o	Download File View File

Crystal structure of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa complexed with adenine, K+ and Zn2+ cations

Czyrko, J., Brzezinski, K.

(2018) Sci Rep 8: 11334-11334

Released	2018-08-08
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Adenosylhomocysteinase (protein)
Unique Ligands	ADE, GOL, K, NAD, PO4, ZN

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6F3P \| pdb_00006f3p	Download File View File

Crystal structure of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa in complex with 3'-deoxyadenosine and K+ cation

Czyrko, J., Brzezinski, K.

(2018) Sci Rep 8: 11334-11334

Released	2018-08-08
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Adenosylhomocysteinase (protein)
Unique Ligands	3AD, CL, K, NAD, PO4

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6F3Q \| pdb_00006f3q	Download File View File

Crystal structure of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa in complex with adenine and Rb+ cation

Czyrko, J., Brzezinski, K.

(2018) Sci Rep 8: 11334-11334

Released	2018-08-08
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Adenosylhomocysteinase (protein)
Unique Ligands	ADE, GOL, NAD, PEG, PO4, RB

Explore in 3D

6GBN \| pdb_00006gbn	Download File View File

Crystal structure of S-adenosyl-L-homocysteine hydrolase from Cytophaga hutchinsonii in complex with adenosine

Czyrko, J., Jaskolski, M., Brzezinski, K.

(2018) Croat Chem Acta 91:

Released	2018-08-08
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	Cytophaga hutchinsonii ATCC 33406
Macromolecule	Adenosylhomocysteinase (protein)
Unique Ligands	ADN, NA, NAD, PEG, PG4

1 to 10 of 10 Structures

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4Z1R | pdb_00004z1r

Crystal structure of collagen-like peptide at 1.27 Angstrom resolution

5TOV | pdb_00005tov

Crystal structure of the inactive form of S-adenosyl-L-homocysteine hydrolase from Thermotoga maritima in binary complex with NADH

5TOW | pdb_00005tow

Crystal structure of the inactive form of S-adenosyl-L-homocysteine hydrolase from Thermotoga maritima in ternary complex with NADH and Adenosine

6EXI | pdb_00006exi

NAD-free crystal structure of S-adenosyl-L-homocysteine hydrolase from Bradyrhizobium elkanii complexed with adenosine

6F3M | pdb_00006f3m

Crystal structure of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa complexed with adenosine, K+ and Zn2+ cations

6F3N | pdb_00006f3n

Crystal structure of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa cocrystallized with SAH in the presence of K+ and Zn2+ cations

6F3O | pdb_00006f3o

Crystal structure of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa complexed with adenine, K+ and Zn2+ cations

6F3P | pdb_00006f3p

Crystal structure of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa in complex with 3'-deoxyadenosine and K+ cation

6F3Q | pdb_00006f3q

Crystal structure of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa in complex with adenine and Rb+ cation

6GBN | pdb_00006gbn

Crystal structure of S-adenosyl-L-homocysteine hydrolase from Cytophaga hutchinsonii in complex with adenosine

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

4Z1R | pdb_00004z1r

5TOV | pdb_00005tov

5TOW | pdb_00005tow

6EXI | pdb_00006exi

6F3M | pdb_00006f3m

6F3N | pdb_00006f3n

6F3O | pdb_00006f3o

6F3P | pdb_00006f3p

6F3Q | pdb_00006f3q

6GBN | pdb_00006gbn