RCSB PDB: Search

2KGK \| pdb_00002kgk	Download File View File

Solution structure of Bacillus anthracis dihydrofolate reductase

Deshmukh, L., Vinogradova, O., Beierlein, J.M., Frey, K.M., Anderson, A.C.

(2009) Biochemistry 48: 4100-4108

Released	2009-05-12
Method	SOLUTION NMR
Organisms	Bacillus anthracis
Macromolecule	Dihydrofolate reductase (protein)
Unique Ligands	N22, NAP

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3E0B \| pdb_00003e0b	Download File View File

Bacillus anthracis Dihydrofolate Reductase complexed with NADPH and 2,4-diamino-5-(3-(2,5-dimethoxyphenyl)prop-1-ynyl)-6-ethylpyrimidine (UCP120B)

Anderson, A.C., Beierlein, J.M., Frey, K.M.

(2008) J Med Chem 51: 7532-7540

Released	2008-11-25
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Bacillus anthracis
Macromolecule	Dihydrofolate reductase (protein)
Unique Ligands	N22, NDP

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3F0B \| pdb_00003f0b	Download File View File

Staphylococcus aureus dihydrofolate reductase complexed with NADPH and 2,4-Diamino-5-[3-(3-methoxy-5-phenylphenyl)but-1-ynyl]-6-methylpyrimidine

Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.

(2009) J Mol Biology 387: 1298-1308

Released	2009-03-24
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Staphylococcus aureus RF122
Macromolecule	Trimethoprim-sensitive dihydrofolate reductase (protein)
Unique Ligands	53R, NDP

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3F0Q \| pdb_00003f0q	Download File View File

Staphylococcus aureus dihydrofolate reductase complexed with NADPH and 2,4-Diamino-5-[3-(3-methoxy-5-(2,6-dimethylphenyl)phenyl)but-1-ynyl]-6-methylpyrimidine

Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.

(2010) Proc Natl Acad Sci U S A 107: 13707-13712

Released	2009-10-06
Method	X-RAY DIFFRACTION 2.08 Å
Organisms	Staphylococcus aureus RF122
Macromolecule	Trimethoprim-sensitive dihydrofolate reductase (protein)
Unique Ligands	52V, NDP

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3F0S \| pdb_00003f0s	Download File View File

Staphylococcus aureus dihydrofolate reductase complexed with NADPH and 2,4-Diamino-5-[3-(3-methoxy-5-(3,5-dimethylphenyl)phenyl)but-1-ynyl]-6-methylpyrimidine

Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.

To be published

Released	2009-10-06
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Staphylococcus aureus RF122
Macromolecule	Trimethoprim-sensitive dihydrofolate reductase (protein)
Unique Ligands	53T, NDP

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3F0U \| pdb_00003f0u	Download File View File

Staphylococcus aureus F98Y mutant dihydrofolate reductase complexed with NADPH and 2,4-Diamino-5-[3-(3-methoxy-5-phenylphenyl)but-1-ynyl]-6-methylpyrimidine

Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.

(2009) J Mol Biology 387: 1298-1308

Released	2009-03-24
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Staphylococcus aureus RF122
Macromolecule	Trimethoprim-sensitive dihydrofolate reductase (protein)
Unique Ligands	53R, NDP

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3F0V \| pdb_00003f0v	Download File View File

Staphylococcus aureus F98Y mutant dihydrofolate reductase complexed with NADPH and 2,4-Diamino-5-[3-(3-methoxy-5-(2,6-dimethylphenyl)phenyl)but-1-ynyl]-6-methylpyrimidine

Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.

To be published

Released	2009-10-06
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Staphylococcus aureus RF122
Macromolecule	Trimethoprim-sensitive dihydrofolate reductase (protein)
Unique Ligands	52V, NDP

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3F0X \| pdb_00003f0x	Download File View File

Staphylococcus aureus F98Y mutant dihydrofolate reductase complexed with NADPH and 2,4-Diamino-5-[3-(3-methoxy-5-(3,5-dimethylphenyl)phenyl)but-1-ynyl]-6-methylpyrimidine

Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.

To be published

Released	2009-10-06
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Staphylococcus aureus RF122
Macromolecule	Trimethoprim-sensitive dihydrofolate reductase (protein)
Unique Ligands	53T, NDP

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3FQ0 \| pdb_00003fq0	Download File View File

Staphylococcus aureus dihydrofolate reductase complexed with NADPH and 2,4-diamino-5-(3-(2,5-dimethoxyphenyl)prop-1-ynyl)-6-ethylpyrimidine (UCP120B)

Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.

(2009) J Mol Biology 387: 1298-1308

Released	2009-03-24
Method	X-RAY DIFFRACTION 1.69 Å
Organisms	Staphylococcus aureus RF122
Macromolecule	Trimethoprim-sensitive dihydrofolate reductase (protein)
Unique Ligands	N22, NDP

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3FQC \| pdb_00003fqc	Download File View File

Staphylococcus aureus dihydrofolate reductase complexed with NADPH and 2,4-diamino-5-[3-(3,4,5-trimethoxyphenyl)pent-1-ynyl]-6-methylpyrimidine (UCP115A)

Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.

(2009) J Mol Biology 387: 1298-1308

Released	2009-03-24
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Staphylococcus aureus RF122
Macromolecule	Trimethoprim-sensitive dihydrofolate reductase (protein)
Unique Ligands	55V, NDP

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3FQF \| pdb_00003fqf	Download File View File

Staphylococcus aureus F98Y mutant dihydrofolate reductase complexed with NADPH and 2,4-diamino-5-[3-(3,4,5-trimethoxyphenyl)pent-1-ynyl]-6-methylpyrimidine (UCP115A)

Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.

(2009) J Mol Biology 387: 1298-1308

Released	2009-03-24
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Staphylococcus aureus RF122
Macromolecule	Trimethoprim-sensitive dihydrofolate reductase (protein)
Unique Ligands	55V, NDP

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3FQO \| pdb_00003fqo	Download File View File

Staphylococcus aureus F98Y mutant dihydrofolate reductase complexed with NADPH and 2,4-diamino-5-[3-(2,5-dimethoxyphenyl)prop-1-ynyl]-6-ethylpyrimidine (UCP120B)

Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.

(2009) J Mol Biology 387: 1298-1308

Released	2009-03-24
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	Staphylococcus aureus RF122
Macromolecule	Trimethoprim-sensitive dihydrofolate reductase (protein)
Unique Ligands	N22, NDP

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3FQV \| pdb_00003fqv	Download File View File

Staphylococcus aureus F98Y mutant dihydrofolate reductase complexed with NADPH and 2,4-diamino-5-[3-(3-methoxy-4-phenylphenyl)but-1-ynyl]-6-methylpyrimidine

Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.

(2009) J Mol Biology 387: 1298-1308

Released	2009-03-24
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Staphylococcus aureus RF122
Macromolecule	Trimethoprim-sensitive dihydrofolate reductase (protein)
Unique Ligands	11F, NDP

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3FQZ \| pdb_00003fqz	Download File View File

Staphylococcus aureus dihydrofolate reductase complexed with NADPH and 2,4-diamino-5-[3-(3-methoxy-4-phenylphenyl)but-1-ynyl]-6-methylpyrimidine

Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.

(2009) J Mol Biology 387: 1298-1308

Released	2009-03-24
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Staphylococcus aureus RF122
Macromolecule	Trimethoprim-sensitive dihydrofolate reductase (protein)
Unique Ligands	11F, NDP

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3I8A \| pdb_00003i8a	Download File View File

Staphylococcus aureus H30N, F98Y Dihydrofolate Reductase complexed with NADPH and 2,4-diamino-5-(3-(2,5-dimethoxyphenyl)prop-1-ynyl)-6-ethylpyrimidine (UCP120B)

Frey, K.M., Lombardo, M.N., Anderson, A.C.

(2010) J Struct Biol 170: 93-97

Released	2010-02-09
Method	X-RAY DIFFRACTION 2.41 Å
Organisms	Staphylococcus aureus
Macromolecule	Dihydrofolate reductase (protein)
Unique Ligands	N22, NDP

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3LG4 \| pdb_00003lg4	Download File View File

Staphylococcus aureus V31Y, F92I mutant dihydrofolate reductase complexed with NADPH and 5-[(3S)-3-(5-methoxy-2',6'-dimethylbiphenyl-3-yl)but-1-yn-1-yl]-6-methylpyrimidine-2,4-diamine

Frey, K.M., Anderson, A.C.

(2010) Proc Natl Acad Sci U S A 107: 13707-13712

Released	2010-07-28
Method	X-RAY DIFFRACTION 3.15 Å
Organisms	Staphylococcus aureus
Macromolecule	Dihydrofolate reductase (protein)
Unique Ligands	52V, NDP

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3SGY \| pdb_00003sgy	Download File View File

Staphylococcus aureus Dihydrofolate Reductase complexed with NADPH and 6-ETHYL-5-[(3S)-3-[3-METHOXY-5-(PYRIDIN-4-YL)PHENYL]BUT-1-YN-1-YL]PYRIMIDINE-2,4-DIAMINE (UCP1006)

Frey, K.M., Anderson, A.C.

(2012) PLoS One 7: e29434-e29434

Released	2012-03-07
Method	X-RAY DIFFRACTION 2.598 Å
Organisms	Staphylococcus aureus
Macromolecule	Dihydrofolate reductase (protein)
Unique Ligands	06W, NDP

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3SH2 \| pdb_00003sh2	Download File View File

Staphylococcus aureus Dihydrofolate Reductase complexed with NADPH and 6-ethyl-5-(3-(4-methoxybiphenyl-3-yl)prop-1-ynyl)pyrimidine-2,4-diamine (UCP120J)

Frey, K.M., Anderson, A.C.

(2012) PLoS One 7: e29434-e29434

Released	2012-03-07
Method	X-RAY DIFFRACTION 2.999 Å
Organisms	Staphylococcus aureus
Macromolecule	Dihydrofolate reductase (protein)
Unique Ligands	5DR, NDP

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4H4M \| pdb_00004h4m	Download File View File

Crystal Structure of HIV-1 Reverse Transcriptase in Complex with (E)-3-(3-chloro-5-(4-chloro-2-(2-(2,4-dioxo-3,4- dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)phenyl)acrylonitrile (JLJ494), a Non-nucleoside Inhibitor

Frey, K.M., Anderson, K.S.

(2012) J Am Chem Soc 134: 19501-19503

Released	2012-12-05
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Human immunodeficiency virus type 1 BH10
Macromolecule	Reverse transcriptase/ribonuclease H, Exoribonuclease H, p51 RT (protein) Reverse transcriptase/ribonuclease H, Exoribonuclease H, p66 RT (protein)
Unique Ligands	494, EDO

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4H4O \| pdb_00004h4o	Download File View File

Crystal Structure of HIV-1 Reverse Transcriptase (RT) in Complex with (E)-3-(3-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)- 4-fluorophenoxy)-5-fluorophenyl)acrylonitrile (JLJ506), A Non-nucleoside inhibitor

Frey, K.M., Anderson, K.S.

(2012) J Am Chem Soc 134: 19501-19503

Released	2012-12-05
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Human immunodeficiency virus type 1 BH10
Macromolecule	Reverse transcriptase/ribonuclease H, Exoribonuclease H, p51 RT (protein) Reverse transcriptase/ribonuclease H, Exoribonuclease H, p66 RT (protein)
Unique Ligands	506

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4KKO \| pdb_00004kko	Download File View File

Crystal Structure of HIV-1 Reverse Transcriptase in Complex with 4-((4-methoxy-6-(2-morpholinoethoxy)-1,3,5-triazin-2-yl)amino)-2-((3-methylbut-2-en-1-yl)oxy)benzonitrile (JLJ513), a non-nucleoside inhibitor

Frey, K.M., Anderson, K.S.

(2013) Bioorg Med Chem Lett 23: 5209-5212

Released	2013-08-14
Method	X-RAY DIFFRACTION 2.89 Å
Organisms	Human immunodeficiency virus type 1 BH10
Macromolecule	HIV-1 reverse transcriptase, p51 subunit (protein) HIV-1 reverse transcriptase, p66 subunit (protein)
Unique Ligands	1RE

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4KO0 \| pdb_00004ko0	Download File View File

CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH an anilinylpyrimidine derivative (JLJ-135)

Das, K., Bauman, J.D., Arnold, E.

(2013) Bioorg Med Chem Lett 23: 5209-5212

Released	2013-08-14
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Human immunodeficiency virus type 1 BH10
Macromolecule	HIV-1 reverse transcriptase, p51 subunit (protein) HIV-1 reverse transcriptase, p66 subunit (protein)
Unique Ligands	EDO, JLJ, SO4

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4KY8 \| pdb_00004ky8	Download File View File

Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, methotrexate, FdUMP and 4-((2-amino-6-methyl-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)thio)-2-chlorophenyl)-L-glutamic acid

Kumar, V.P., Anderson, K.S.

(2013) Bioorg Med Chem Lett 23: 5426-5428

Released	2013-08-21
Method	X-RAY DIFFRACTION 3.084 Å
Organisms	Cryptosporidium hominis
Macromolecule	Bifunctional thymidylate synthase-dihydrofolate reductase (protein)
Unique Ligands	1UF, MTX, NDP, UFP

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4LSL \| pdb_00004lsl	Download File View File

Crystal Structure of HIV-1 Reverse Transcriptase in Complex with (E)-3-(3-(4-chloro-2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)phenyl)acrylonitrile (JLJ476), a non-nucleoside inhibitor

Frey, K.M., Anderson, K.S.

(2014) Chem Biol Drug Des 83: 541-549

Released	2013-12-25
Method	X-RAY DIFFRACTION 2.69 Å
Organisms	Human immunodeficiency virus type 1 BH10
Macromolecule	HIV-1 reverse transcriptase, p51 subunit (protein) HIV-1 reverse transcriptase, p66 subunit (protein)
Unique Ligands	1YQ

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4LSN \| pdb_00004lsn	Download File View File

Crystal Structure of HIV-1 Reverse Transcriptase in Complex with (E)-3-(3-bromo-5-(4-chloro-2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)phenyl)acrylonitrile (JLJ518), a non-nucleoside inhibitor

Gray, W.T., Frey, K.M., Anderson, K.S.

(2014) Chem Biol Drug Des 83: 541-549

Released	2013-12-25
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Human immunodeficiency virus type 1 BH10
Macromolecule	HIV-1 reverse transcriptase, p51 subunit (protein) HIV-1 reverse transcriptase, p66 subunit (protein)
Unique Ligands	1YR

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2KGK | pdb_00002kgk

3E0B | pdb_00003e0b

3F0B | pdb_00003f0b

3F0Q | pdb_00003f0q

3F0S | pdb_00003f0s

3F0U | pdb_00003f0u

3F0V | pdb_00003f0v

3F0X | pdb_00003f0x

3FQ0 | pdb_00003fq0

3FQC | pdb_00003fqc

3FQF | pdb_00003fqf

3FQO | pdb_00003fqo

3FQV | pdb_00003fqv

3FQZ | pdb_00003fqz

3I8A | pdb_00003i8a

3LG4 | pdb_00003lg4

3SGY | pdb_00003sgy

3SH2 | pdb_00003sh2

4H4M | pdb_00004h4m

4H4O | pdb_00004h4o

4KKO | pdb_00004kko

4KO0 | pdb_00004ko0

4KY8 | pdb_00004ky8

4LSL | pdb_00004lsl

4LSN | pdb_00004lsn