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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Marriott, D."

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Search Summary

This query matches 8 Structures.

Refinements

Structure Determination Methodology

experimental (8)

Scientific Name of Source Organism

	Cryptosporidium hominis (4)
	Saccharomyces cerevisiae S288C (3)
	Plasmodium falciparum (1)

Taxonomy

Eukaryota (8)

Experimental Method

X-RAY DIFFRACTION (8)

Polymer Entity Type

Protein (8)

Refinement Resolution (Å)

	2.0 - 2.5 (4)
	2.5 - 3.0 (2)
	3.0 - 3.5 (2)

Release Date

	1995 - 1999 (1)
	2010 - 2014 (6)
	2020 - 2024 (1)

Enzyme Classification Name

	Oxidoreductases (6)
	Transferases (3)
	Isomerases (1)

Symmetry Type

	Cyclic (6)
	Asymmetric (4)

SCOP Classification

	Alpha and beta proteins (a/b) (4)
	Alpha and beta proteins (a+b) (3)

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1 to 8 of 8 Structures

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1YDV \| pdb_00001ydv	Download File View File

TRIOSEPHOSPHATE ISOMERASE (TIM)

Velankar, S.S., Murthy, M.R.N.

(1997) Structure 5: 751-761

Released	1997-10-15
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Plasmodium falciparum
Macromolecule	TRIOSEPHOSPHATE ISOMERASE (protein)

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3UGK \| pdb_00003ugk	Download File View File

Crystal Structure of C205S mutant and Saccharopine Dehydrogenase from Saccharomyces cerevisiae.

Cook, P.F., Kumar, V.P., Thomas, L.M., West, A.H., Bobyk, K.D.

(2012) Biochemistry 51: 857-866

Released	2012-02-01
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Saccharopine dehydrogenase [NAD+, L-lysine-forming] (protein)

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3UH1 \| pdb_00003uh1	Download File View File

Crystal Structure of Saccharopine Dehydrogenase from Saccharomyces cerevisiae with bound saccharopine and NADH

Kumar, V.P., Thomas, L.M., Bobyk, K.D., Andi, B., West, A.H., Cook, P.F.

(2012) Biochemistry 51: 857-866

Released	2012-02-01
Method	X-RAY DIFFRACTION 2.17 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Saccharopine dehydrogenase [NAD+, L-lysine-forming] (protein)
Unique Ligands	GOL, NAI, SHR

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3UHA \| pdb_00003uha	Download File View File

Crystal Structure of Saccharopine Dehydrogenase from Saccharomyces cervisiae complexed with NAD.

Cook, P.F., Kumar, V.P., Thomas, L.M., West, A.H., Bobyk, K.D.

(2012) Biochemistry 51: 857-866

Released	2012-02-01
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Saccharopine dehydrogenase [NAD+, L-lysine-forming] (protein)
Unique Ligands	CL, NAD

Explore in 3D

4KY8 \| pdb_00004ky8	Download File View File

Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, methotrexate, FdUMP and 4-((2-amino-6-methyl-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)thio)-2-chlorophenyl)-L-glutamic acid

Kumar, V.P., Anderson, K.S.

(2013) Bioorg Med Chem Lett 23: 5426-5428

Released	2013-08-21
Method	X-RAY DIFFRACTION 3.084 Å
Organisms	Cryptosporidium hominis
Macromolecule	Bifunctional thymidylate synthase-dihydrofolate reductase (protein)
Unique Ligands	1UF, MTX, NDP, UFP

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4Q0D \| pdb_00004q0d	Download File View File

Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, FdUMP, methotrexate and 2-amino-4-oxo-4,7-dihydro-pyrrolo[2,3-d]pyrimidine-methyl-phenyl-L-glutamic acid.

Kumar, V.P., Anderson, K.S.

(2014) Bioorg Med Chem Lett 24: 4158-4161

Released	2014-10-15
Method	X-RAY DIFFRACTION 3.449 Å
Organisms	Cryptosporidium hominis
Macromolecule	Bifunctional dihydrofolate reductase-thymidylate synthase (protein)
Unique Ligands	2XB, MTX, NDP, UFP

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4Q0E \| pdb_00004q0e	Download File View File

Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, FdUMP and 2-amino-4-oxo-4,7-dihydro-pyrrolo[2,3-d]pyrimidine-methyl-phenyl-L-glutamic acid.

Kumar, V.P., Anderson, K.S.

(2014) Bioorg Med Chem Lett 24: 4158-4161

Released	2014-10-15
Method	X-RAY DIFFRACTION 2.78 Å
Organisms	Cryptosporidium hominis
Macromolecule	Bifunctional dihydrofolate reductase-thymidylate synthase (protein)
Unique Ligands	2XB, NDP, UFP

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6WEP \| pdb_00006wep	Download File View File

Crystal structure of TS-DHFR from Cryptosporidium hominis with Apo-TS site

Czyzyk, D.J., Ruiz, V.G., Kumar, V.P., Jorgensen, W.L., Anderson, K.S.

(2020) Bioorg Med Chem Lett 30: 127292-127298

Released	2020-06-17
Method	X-RAY DIFFRACTION 2.79 Å
Organisms	Cryptosporidium hominis
Macromolecule	Bifunctional dihydrofolate reductase-thymidylate synthase (protein)
Unique Ligands	MTX, NDP

1 to 8 of 8 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1YDV | pdb_00001ydv

TRIOSEPHOSPHATE ISOMERASE (TIM)

3UGK | pdb_00003ugk

Crystal Structure of C205S mutant and Saccharopine Dehydrogenase from Saccharomyces cerevisiae.

3UH1 | pdb_00003uh1

Crystal Structure of Saccharopine Dehydrogenase from Saccharomyces cerevisiae with bound saccharopine and NADH

3UHA | pdb_00003uha

Crystal Structure of Saccharopine Dehydrogenase from Saccharomyces cervisiae complexed with NAD.

4KY8 | pdb_00004ky8

Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, methotrexate, FdUMP and 4-((2-amino-6-methyl-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)thio)-2-chlorophenyl)-L-glutamic acid

4Q0D | pdb_00004q0d

Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, FdUMP, methotrexate and 2-amino-4-oxo-4,7-dihydro-pyrrolo[2,3-d]pyrimidine-methyl-phenyl-L-glutamic acid.

4Q0E | pdb_00004q0e

Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, FdUMP and 2-amino-4-oxo-4,7-dihydro-pyrrolo[2,3-d]pyrimidine-methyl-phenyl-L-glutamic acid.

6WEP | pdb_00006wep

Crystal structure of TS-DHFR from Cryptosporidium hominis with Apo-TS site

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1YDV | pdb_00001ydv

3UGK | pdb_00003ugk

3UH1 | pdb_00003uh1

3UHA | pdb_00003uha

4KY8 | pdb_00004ky8

4Q0D | pdb_00004q0d

4Q0E | pdb_00004q0e

6WEP | pdb_00006wep