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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Pike, R.N."

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Search Summary

This query matches 40 Structures.

Refinements

Structure Determination Methodology

experimental (40)

Scientific Name of Source Organism

	Homo sapiens (17)
	Gallus gallus (4)
	Ananas comosus (3)
	Dichelobacter nodosus VCS1703A (3)
	Dichelobacter nodosus (2)
	Escherichia coli K-12 (2)
	Helicobacter pylori 26695 (2)
	Sarcoptes scabiei (2)
	Escherichia coli (1)
	Haementeria ghilianii (1)

More...

Taxonomy

	Eukaryota (27)
	Bacteria (13)

Experimental Method

X-RAY DIFFRACTION (40)

Polymer Entity Type

Protein (40)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (11)
	2.0 - 2.5 (18)
	2.5 - 3.0 (6)
	3.0 - 3.5 (3)
	> 4.5 (1)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (2)
	2005 - 2009 (10)
	2010 - 2014 (18)
	2015 - 2019 (9)

Enzyme Classification Name

	Hydrolases (15)
	Lyases (3)

Membrane Protein Annotation

	MemProtMD (1)
	OPM (1)
	PDBTM (1)

Symmetry Type

	Asymmetric (35)
	Cyclic (4)
	Dihedral (3)

SCOP Classification

	Multi-domain proteins (alpha and beta) (4)
	All beta proteins (3)
	Alpha and beta proteins (a+b) (3)
	Artifacts (1)
	Membrane and cell surface proteins and peptides (1)
	Small proteins (1)

AllSelected

1 to 25 of 40 Structures

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1AZX \| pdb_00001azx	Download File View File

ANTITHROMBIN/PENTASACCHARIDE COMPLEX

Jin, L., Abrahams, J.P., Skinner, R., Petitou, M., Pike, R.N., Carrell, R.W.

(1997) Proc Natl Acad Sci U S A 94: 14683-14688

Released	1999-01-13
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	ANTITHROMBIN (protein)
Unique Ligands	NAG
Unique branched monosaccharides	GU1, GU6, Z9H, Z9K, Z9L

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1D5S \| pdb_00001d5s	Download File View File

CRYSTAL STRUCTURE OF CLEAVED ANTITRYPSIN POLYMER

Dunstone, M.A., Dai, W., Whisstock, J.C., Rossjohn, J., Pike, R.N., Feil, S.C., Le Bonneic, B.F., Parker, M.W., Bottomley, S.P.

(2000) Protein Sci 9: 417-420

Released	2000-04-02
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	P1-ARG ANTITRYPSIN (protein)

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1MTP \| pdb_00001mtp	Download File View File

The X-ray crystal structure of a serpin from a thermophilic prokaryote

Irving, J.A., Cabrita, L.D., Rossjohn, J., Pike, R.N., Bottomley, S.P., Whisstock, J.C.

(2003) Structure 11: 387-397

Released	2003-04-15
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Thermobifida fusca
Macromolecule	Serine Proteinase Inhibitor (SERPIN), Chain A (protein) Serine Proteinase Inhibitor (SERPIN), Chain B (protein)

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1YXA \| pdb_00001yxa	Download File View File

Serpina3n, a murine orthologue of human antichymotrypsin

Horvath, A.J., Irving, J.A., Law, R.H., Rossjohn, J., Bottomley, S.P., Quinsey, N.S., Pike, R.N., Coughlin, P.B., Whisstock, J.C.

(2005) J Biological Chem 280: 43168-43178

Released	2005-09-06
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mus musculus
Macromolecule	serine (or cysteine) proteinase inhibitor, clade A, member 3N (protein)

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2DUT \| pdb_00002dut	Download File View File

Crystal structure of a M-loop deletion variant of MENT in the native conformation

Whisstock, J.C., Buckle, A.M., McGowan, S., Irving, J.A.

(2006) EMBO J 25: 3144-3155

Released	2006-08-08
Method	X-RAY DIFFRACTION 3 Å
Organisms	Gallus gallus
Macromolecule	Heterochromatin-associated protein MENT (protein)

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2H4P \| pdb_00002h4p	Download File View File

Crystal structure of wildtype MENT in the cleaved conformation

Buckle, A.M., McGowan, S., Irving, J.A., Whisstock, J.C.

(2006) EMBO J 25: 3144-3155

Released	2006-07-18
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Gallus gallus
Macromolecule	Heterochromatin-associated protein MENT (protein)

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2H4Q \| pdb_00002h4q	Download File View File

Crystal structure of a M-loop deletion variant of MENT in the cleaved conformation

Whisstock, J.C., Buckle, A.M., McGowan, S., Irving, J.A.

(2006) EMBO J 25: 3144-3155

Released	2006-07-18
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Gallus gallus
Macromolecule	Heterochromatin-associated protein MENT (protein)

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2H4R \| pdb_00002h4r	Download File View File

Crystal structure of wildtype MENT in the native conformation

Irving, J.A., Whisstock, J.C., Buckle, A.M., McGowan, S.

(2006) EMBO J 25: 3144-3155

Released	2006-07-18
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Gallus gallus
Macromolecule	Heterochromatin-associated protein MENT (protein)

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2OKJ \| pdb_00002okj	Download File View File

The X-ray crystal structure of the 67kDa isoform of Glutamic Acid Decarboxylase (GAD67)

Buckle, A.M., Fenalti, G., Law, R.H.P., Whisstock, J.C.

(2007) Nat Struct Mol Biol 14: 280-286

Released	2007-03-27
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Glutamate decarboxylase 1 (protein)
Unique Ligands	ABU, PLZ

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2OKK \| pdb_00002okk	Download File View File

The X-ray crystal structure of the 65kDa isoform of Glutamic Acid Decarboxylase (GAD65)

Buckle, A.M., Fenalti, G., Law, R.H.P., Whisstock, J.C.

(2007) Nat Struct Mol Biol 14: 280-286

Released	2007-03-27
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Glutamate decarboxylase 2 (protein)
Unique Ligands	ABU, GOL

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2QP2 \| pdb_00002qp2	Download File View File

Structure of a MACPF/perforin-like protein

Rosado, C.J., Buckle, A.M., Law, R.H.P., Butcher, R.E., Kan, W.T., Bird, C.H., Ung, K., Browne, K.A., Baran, K., Bashtannyk-Puhalovich, T.A., Faux, N.G., Wong, W., Porter, C.J., Pike, R.N., Ellisdon, A.M., Pearce, M.C., Bottomley, S.P., Emsley, J., Smith, A.I., Rossjohn, J., Hartland, E.L., Voskoboinik, I., Trapani, J.A., Bird, P.I., Dunstone, M.A., Whisstock, J.C.

(2007) Science 317: 1548-1551

Released	2007-09-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Photorhabdus laumondii subsp. laumondii
Macromolecule	Unknown protein (protein)
Unique Ligands	CA

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3H7O \| pdb_00003h7o	Download File View File

Crystal structure of scabies mite inactivated protease paralogue S-I1 (SMIPP-S-I1)

Buckle, A.M.

(2009) J Mol Biology 390: 635-645

Released	2009-05-12
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Sarcoptes scabiei
Macromolecule	Group 3 allergen SMIPP-S Yv6023A04 (protein)
Unique Ligands	GOL, SO4

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3H7T \| pdb_00003h7t	Download File View File

Crystal structure of scabies mite inactivated protease paralogue S-D1 (SMIPP-S-D1)

Buckle, A.M.

(2009) J Mol Biology 390: 635-645

Released	2009-05-12
Method	X-RAY DIFFRACTION 2 Å
Organisms	Sarcoptes scabiei
Macromolecule	Group 3 allergen SMIPP-S YvT004A06 (protein)
Unique Ligands	ZN

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3LPA \| pdb_00003lpa	Download File View File

Crystal structure of a subtilisin-like protease

Porter, C.J., Wong, W., Whisstock, J.C., Rood, J.I., Kennan, R.M.

(2010) PLoS Pathog 6: e1001210-e1001210

Released	2010-12-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Dichelobacter nodosus VCS1703A
Macromolecule	Acidic extracellular subtilisin-like protease AprV2 (protein)
Unique Ligands	CA

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3LPC \| pdb_00003lpc	Download File View File

Crystal structure of a subtilisin-like protease

Porter, C.J., Wong, W., Whisstock, J.C., Rood, J.I., Kennan, R.M.

(2010) PLoS Pathog 6: e1001210-e1001210

Released	2010-12-08
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Dichelobacter nodosus
Macromolecule	AprB2 (protein)
Unique Ligands	ACT, CA, PEG

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3LPD \| pdb_00003lpd	Download File View File

Crystal structure of a subtilisin-like protease

Porter, C.J., Wong, W., Whisstock, J.C., Rood, J.I., Kennan, R.M.

(2010) PLoS Pathog 6: e1001210-e1001210

Released	2010-12-08
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Dichelobacter nodosus VCS1703A
Macromolecule	Acidic extracellular subtilisin-like protease AprV2 (protein)
Unique Ligands	CA

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3TI7 \| pdb_00003ti7	Download File View File

Crystal structure of the basic protease BprV from the ovine footrot pathogen, Dichelobacter nodosus

Wong, W., Whisstock, J.C., Porter, C.J.

(2011) J Biological Chem 286: 42180-42187

Released	2011-10-19
Method	X-RAY DIFFRACTION 2 Å
Organisms	Dichelobacter nodosus VCS1703A
Macromolecule	Basic extracellular subtilisin-like protease BprV (protein)
Unique Ligands	CA

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3TI9 \| pdb_00003ti9	Download File View File

Crystal structure of the basic protease BprB from the ovine footrot pathogen, Dichelobacter nodosus

Wong, W., Whisstock, J.C., Porter, C.J.

(2011) J Biological Chem 286: 42180-42187

Released	2011-10-19
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Dichelobacter nodosus
Macromolecule	Serine protease (protein)
Unique Ligands	CA, CL, GOL

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3VP6 \| pdb_00003vp6	Download File View File

Structural characterization of Glutamic Acid Decarboxylase; insights into the mechanism of autoinactivation

Langendorf, C.G., Tuck, K.L., Key, T.L.G., Rosado, C.J., Wong, A.S.M., Fenalti, G., Buckle, A.M., Law, R.H.P., Whisstock, J.C.

(2013) Biosci Rep 33: 137-144

Released	2013-01-16
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Glutamate decarboxylase 1 (protein)
Unique Ligands	GOL, HLD

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4DUR \| pdb_00004dur	Download File View File

The X-ray Crystal Structure of Full-Length type II Human Plasminogen

Law, R.H.P., Caradoc-Davies, T., Whisstock, J.C.

(2012) Cell Rep 1: 185-190

Released	2012-03-28
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Homo sapiens
Macromolecule	Plasminogen (protein)
Unique Ligands	ACT, BCT, CL, K
Unique branched monosaccharides	GAL, NAG, SIA

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4DUU \| pdb_00004duu	Download File View File

The X-ray Crystal Structure of Full-Length type I Human Plasminogen

Law, R.H.P., Caradoc-Davies, T., Whisstock, J.C.

(2012) Cell Rep 1: 185-190

Released	2012-03-28
Method	X-RAY DIFFRACTION 5.2 Å
Organisms	Homo sapiens
Macromolecule	Plasminogen (protein)

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4FTF \| pdb_00004ftf	Download File View File

Structure of the Type II secretion system pilotin AspS from Vibrio cholerae

Korotkov, K.V., Evans, T.J.

(2013) PLoS Pathog 9: e1003117-e1003117

Released	2012-11-28
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Vibrio cholerae 569B
Macromolecule	Alternate secretin pathway subunit S (VC395_1821, VC1703) (protein)
Unique Ligands	ACT, ZN

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4J1Y \| pdb_00004j1y	Download File View File

The X-ray crystal structure of human complement protease C1s zymogen

Perry, A.J., Wijeyewickrema, L.C., Wilmann, P.G., Gunzburg, M.J., D'Andrea, L., Irving, J.A., Pang, S.S., Duncan, R.C., Wilce, J.A., Whisstock, J.C., Pike, R.N.

(2013) J Biological Chem 288: 15821-15829

Released	2013-04-24
Method	X-RAY DIFFRACTION 2.6645 Å
Organisms	Homo sapiens
Macromolecule	Complement C1s subcomponent (protein)

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4KKD \| pdb_00004kkd	Download File View File

The X-ray crystal structure of Mannose-binding lectin-associated serine proteinase-3 reveals the structural basis for enzyme inactivity associated with the 3MC syndrome

Yongqing, T., Wilmann, P.G., Reeve, S.B., Coetzer, T.H., Smith, A.I., Whisstock, J.C., Pike, R.N., Wijeyewickrema, L.C.

(2013) J Biological Chem 288: 22399-22407

Released	2013-07-03
Method	X-RAY DIFFRACTION 2.5991 Å
Organisms	Homo sapiens
Macromolecule	Mannan-binding lectin serine protease 1 (protein)
Unique Ligands	IMD

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4MCY \| pdb_00004mcy	Download File View File

Immune Receptor

Scally, S.W., Rossjohn, J.

(2013) J Exp Medicine 210: 2569-2582

Released	2013-11-27
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Citrullinated Vimentin (protein) HLA class II histocompatibility antigen, DR alpha chain (protein) HLA class II histocompatibility antigen, DRB1-4 beta chain (protein)
Unique Ligands	EDO, NAG

1 to 25 of 40 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1AZX | pdb_00001azx

1D5S | pdb_00001d5s

1MTP | pdb_00001mtp

1YXA | pdb_00001yxa

2DUT | pdb_00002dut

2H4P | pdb_00002h4p

2H4Q | pdb_00002h4q

2H4R | pdb_00002h4r

2OKJ | pdb_00002okj

2OKK | pdb_00002okk

2QP2 | pdb_00002qp2

3H7O | pdb_00003h7o

3H7T | pdb_00003h7t

3LPA | pdb_00003lpa

3LPC | pdb_00003lpc

3LPD | pdb_00003lpd

3TI7 | pdb_00003ti7

3TI9 | pdb_00003ti9

3VP6 | pdb_00003vp6

4DUR | pdb_00004dur

4DUU | pdb_00004duu

4FTF | pdb_00004ftf

4J1Y | pdb_00004j1y

4KKD | pdb_00004kkd

4MCY | pdb_00004mcy