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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Ravichandran, M."

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Search Summary

This query matches 241 Structures.

Refinements

Structure Determination Methodology

experimental (241)

Scientific Name of Source Organism

	Equus caballus (45)
	Tetronarce californica (41)
	Lucilia cuprina (21)
	Aequorea victoria (17)
	Brevundimonas diminuta (12)
	Chlorella variabilis (12)
	Bacillus thermoproteolyticus (8)
	Bacillus thuringiensis serovar israelensis (8)
	Thermobifida fusca (8)
	Gallus gallus (7)

More...

Taxonomy

	Eukaryota (160)
	Bacteria (73)
	Archaea (8)

Experimental Method

X-RAY DIFFRACTION (241)

Polymer Entity Type

Protein (241)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (50)
	1.5 - 2.0 (76)
	2.0 - 2.5 (80)
	2.5 - 3.0 (25)
	3.0 - 3.5 (9)

Release Date

	2000 - 2004 (16)
	2005 - 2009 (26)
	2010 - 2014 (35)
	2015 - 2019 (66)
	2020 - 2024 (94)
	2025 - 2029 (4)

Enzyme Classification Name

	Oxidoreductases (68)
	Hydrolases (88)
	Lyases (12)
	Transferases (6)

Membrane Protein Annotation

	PDBTM (7)
	MemProtMD (6)
	mpstruc (6)
	OPM (3)

Symmetry Type

	Asymmetric (128)
	Cyclic (97)
	Dihedral (20)

SCOP Classification

	Alpha and beta proteins (a/b) (79)
	Alpha and beta proteins (a+b) (34)
	Artifacts (10)
	Membrane and cell surface proteins and peptides (6)
	All alpha proteins (4)
	All beta proteins (1)

AllSelected

1 to 25 of 241 Structures

Page 1 of 10

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1GSI \| pdb_00001gsi	Download File View File

CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE COMPLEXED WITH THYMIDINE MONOPHOSPHATE (TMP)

Ursby, T., Weik, M., Fioravanti, E., Delarue, M., Goeldner, M., Bourgeois, D.

(2002) Acta Crystallogr D Biol Crystallogr 58: 607

Released	2002-03-28
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	THYMIDYLATE KINASE (protein)
Unique Ligands	ACT, MG, SO4, TMP

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1GTV \| pdb_00001gtv	Download File View File

CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE COMPLEXED WITH THYMIDINE-5'-DIPHOSPHATE (TDP)

Ursby, T., Weik, M., Fioravanti, E., Delarue, M., Goeldner, M., Bourgeois, D.

(2002) Acta Crystallogr D Biol Crystallogr 58: 607

Released	2002-03-28
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	THYMIDYLATE KINASE (protein)
Unique Ligands	ACT, MG, SO4, TMP, TYD

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1N5I \| pdb_00001n5i	Download File View File

CRYSTAL STRUCTURE OF INACTIVE MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE COMPLEXED WITH THYMIDINE MONOPHOSPHATE (TMP) AT PH 4.6 (RESOLUTION 1.85 A)

Fioravanti, E., Haouz, A., Ursby, T., Munier-Lehmann, H., Delarue, M., Bourgeois, D.

(2003) J Mol Biology 327: 1077-1092

Released	2003-04-08
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	THYMIDYLATE KINASE (protein)
Unique Ligands	ATP, FLC, SO4, TMP

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1N5J \| pdb_00001n5j	Download File View File

CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE COMPLEXED WITH THYMIDINE DIPHOSPHATE (TDP) AND THYMIDINE TRIPHOSPHATE (TTP) AT PH 5.4 (1.85 A RESOLUTION)

Fioravanti, E., Haouz, A., Ursby, T., Munier-Lehmann, H., Delarue, M., Bourgeois, D.

(2003) J Mol Biology 327: 1077-1092

Released	2003-04-15
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	THYMIDYLATE KINASE (protein)
Unique Ligands	MG, SO4, TTP, TYD

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1N5K \| pdb_00001n5k	Download File View File

CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE CRYSTALLIZED IN SODIUM MALONATE (RESOLUTION 2.1 A)

Fioravanti, E., Haouz, A., Ursby, T., Munier-Lehmann, H., Delarue, M., Bourgeois, D.

(2003) J Mol Biology 375: 1077-1092

Released	2003-04-15
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	THYMIDYLATE KINASE (protein)
Unique Ligands	ACT, MG, TMP

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1N5L \| pdb_00001n5l	Download File View File

CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE KINASE CRYSTALLIZED IN SODIUM MALONATE, AFTER CATALYSIS IN THE CRYSTAL (2.3 A RESOLUTION)

Fioravanti, E., Haouz, A., Ursby, T., Munier-Lehmann, H., Delarue, M., Bourgeois, D.

(2003) J Mol Biology 375: 1077-1092

Released	2003-04-15
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	THYMIDYLATE KINASE (protein)
Unique Ligands	ACT, DPO, MG, TMP, TYD

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1QID \| pdb_00001qid	Download File View File

SPECIFIC CHEMICAL AND STRUCTURAL DAMAGE AT NINE TIME POINTS (POINT A) CAUSED BY INTENSE SYNCHROTRON RADIATION TO TORPEDO CALIFORNICA ACETYLCHOLINESTERASE

Kryger, G., Weik, M., Ravelli, R.B.G.

(2000) Proc Natl Acad Sci U S A 97: 623-628

Released	2000-01-28
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Tetronarce californica
Macromolecule	ACETYLCHOLINESTERASE (protein)

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1QIE \| pdb_00001qie	Download File View File

SPECIFIC CHEMICAL AND STRUCTURAL DAMAGE AT NINE TIME POINTS (POINT B) CAUSED BY INTENSE SYNCHROTRON RADIATION TO TORPEDO CALIFORNICA ACETYLCHOLINESTERASE

Kryger, G., Weik, M., Ravelli, R.B.G.

(2000) Proc Natl Acad Sci U S A 97: 623-628

Released	2000-01-28
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Tetronarce californica
Macromolecule	ACETYLCHOLINESTERASE (protein)

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1QIF \| pdb_00001qif	Download File View File

SPECIFIC CHEMICAL AND STRUCTURAL DAMAGE AT NINE TIME POINTS (POINT C) CAUSED BY INTENSE SYNCHROTRON RADIATION TO TORPEDO CALIFORNICA ACETYLCHOLINESTERASE

Kryger, G., Weik, M., Ravelli, R.B.G.

(2000) Proc Natl Acad Sci U S A 97: 623-628

Released	2000-01-28
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Tetronarce californica
Macromolecule	ACETYLCHOLINESTERASE (protein)

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1QIG \| pdb_00001qig	Download File View File

SPECIFIC CHEMICAL AND STRUCTURAL DAMAGE AT NINE TIME POINTS (POINT D) CAUSED BY INTENSE SYNCHROTRON RADIATION TO TORPEDO CALIFORNICA ACETYLCHOLINESTERASE

Kryger, G., Weik, M., Ravelli, R.B.G.

(2000) Proc Natl Acad Sci U S A 97: 623-628

Released	2000-01-28
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Tetronarce californica
Macromolecule	ACETYLCHOLINESTERASE (protein)

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1QIH \| pdb_00001qih	Download File View File

SPECIFIC CHEMICAL AND STRUCTURAL DAMAGE AT NINE TIME POINTS (POINT E) CAUSED BY INTENSE SYNCHROTRON RADIATION TO TORPEDO CALIFORNICA ACETYLCHOLINESTERASE

Kryger, G., Weik, M., Ravelli, R.B.G.

(2000) Proc Natl Acad Sci U S A 97: 623-628

Released	2000-01-28
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Tetronarce californica
Macromolecule	PROTEIN (ACETYLCHOLINESTERASE) (protein)

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1QII \| pdb_00001qii	Download File View File

SPECIFIC CHEMICAL AND STRUCTURAL DAMAGE AT NINE TIME POINTS (POINT F) CAUSED BY INTENSE SYNCHROTRON RADIATION TO TORPEDO CALIFORNICA ACETYLCHOLINESTERASE

Kryger, G., Weik, M., Ravelli, R.B.G.

(2000) Proc Natl Acad Sci U S A 97: 623-628

Released	2000-01-28
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Tetronarce californica
Macromolecule	ACETYLCHOLINESTERASE (protein)

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1QIJ \| pdb_00001qij	Download File View File

SPECIFIC CHEMICAL AND STRUCTURAL DAMAGE AT NINE TIME POINTS (POINT G) CAUSED BY INTENSE SYNCHROTRON RADIATION TO TORPEDO CALIFORNICA ACETYLCHOLINESTERASE

Kryger, G., Weik, M., Ravelli, R.B.G.

(2000) Proc Natl Acad Sci U S A 97: 623-628

Released	2000-01-28
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Tetronarce californica
Macromolecule	ACETYLCHOLINESTERASE (protein)

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1QIK \| pdb_00001qik	Download File View File

SPECIFIC CHEMICAL AND STRUCTURAL DAMAGE AT NINE TIME POINTS (POINT H) CAUSED BY INTENSE SYNCHROTRON RADIATION TO TORPEDO CALIFORNICA ACETYLCHOLINESTERASE

Kryger, G., Weik, M., Ravelli, R.B.G.

(2000) Proc Natl Acad Sci U S A 97: 623-628

Released	2000-01-28
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Tetronarce californica
Macromolecule	ACETYLCHOLINESTERASE (protein)

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1QIM \| pdb_00001qim	Download File View File

SPECIFIC CHEMICAL AND STRUCTURAL DAMAGE AT NINE TIME POINTS (POINT I) CAUSED BY INTENSE SYNCHROTRON RADIATION TO TORPEDO CALIFORNICA ACETYLCHOLINESTERASE

Kryger, G., Weik, M., Ravelli, R.B.G.

(2000) Proc Natl Acad Sci U S A 97: 623-628

Released	2000-01-28
Method	X-RAY DIFFRACTION 3 Å
Organisms	Tetronarce californica
Macromolecule	ACETYLCHOLINESTERASE (protein)

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1QIO \| pdb_00001qio	Download File View File

SPECIFIC CHEMICAL AND STRUCTURAL DAMAGE CAUSED BY INTENSE SYNCHROTRON RADIATION TO HEN EGG WHITE LYSOZYME

Kryger, G., Weik, M., Ravelli, R.B.

(2000) Proc Natl Acad Sci U S A 97: 623-628

Released	2001-04-11
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Gallus gallus
Macromolecule	LYSOZYME (protein)
Unique Ligands	CL, NA

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2C4H \| pdb_00002c4h	Download File View File

Torpedo californica acetylcholinesterase in complex with 500mM acetylthiocholine

Colletier, J.P., Fournier, D., Greenblatt, H.M., Sussman, J.L., Zaccai, G., Silman, I., Weik, M.

(2006) EMBO J 25: 2746-2756

Released	2006-06-14
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Tetronarce californica
Macromolecule	ACETYLCHOLINESTERASE (protein)
Unique Ligands	ACE, ACT, AT3, CL, NAG, PGE

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2C58 \| pdb_00002c58	Download File View File

Torpedo californica acetylcholinesterase in complex with 20mM acetylthiocholine

Colletier, J.P., Fournier, D., Greenblatt, H.M., Sussman, J.L., Zaccai, G., Silman, I., Weik, M.

(2006) EMBO J 25: 2746

Released	2006-06-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Tetronarce californica
Macromolecule	ACETYLCHOLINESTERASE (protein)
Unique Ligands	AT3, CL, ETM, NAG, PGE

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2C5F \| pdb_00002c5f	Download File View File

Torpedo californica acetylcholinesterase in complex with a non hydrolysable substrate analogue, 4-oxo-N,N,N-trimethylpentanaminium

Colletier, J.P., Fournier, D., Greenblatt, H.M., Sussman, J.L., Zaccai, G., Silman, I., Weik, M.

(2006) EMBO J 25: 2746

Released	2006-06-14
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Tetronarce californica
Macromolecule	ACETYLCHOLINESTERASE (protein)
Unique Ligands	CHH, NAG, NWA, PGE

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2C5G \| pdb_00002c5g	Download File View File

Torpedo californica acetylcholinesterase in complex with 20mM thiocholine

Colletier, J.P., Fournier, D., Greenblatt, H.M., Sussman, J.L., Zaccai, G., Silman, I., Weik, M.

(2006) EMBO J 25: 2746

Released	2006-06-14
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Tetronarce californica
Macromolecule	ACETYLCHOLINESTERASE (protein)
Unique Ligands	CL, ETM, NAG, PGE

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2CEK \| pdb_00002cek	Download File View File

Conformational Flexibility in the Peripheral Site of Torpedo californica Acetylcholinesterase Revealed by the Complex Structure with a Bifunctional Inhibitor

Sanson, B., Colletier, J.P., Nachon, F., Gabellieri, E., Fattorusso, C., Campiani, G., Weik, M.

(2006) J Am Chem Soc 128: 4526-4527

Released	2006-04-10
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Tetronarce californica
Macromolecule	ACETYLCHOLINESTERASE (protein)
Unique Ligands	MES, N8T, NAG, PGE
Unique branched monosaccharides	NAG

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2J4C \| pdb_00002j4c	Download File View File

Structure of human Butyrylcholinesterase in complex with 10mM HgCl2

Colletier, J.P., Frasco, M.F., Carvalho, F., Guilhermino, L., Stojan, J., Fournier, D., Weik, M.

(2007) FEBS J 274: 1849

Released	2007-03-27
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Homo sapiens
Macromolecule	CHOLINESTERASE (protein)
Unique Ligands	BUA, CL, GOL, HG, MES, NAG, SO4
Unique branched monosaccharides	FUC, NAG