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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Tucker, S.J."

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Search Summary

This query matches 28 Structures.

Refinements

Structure Determination Methodology

experimental (28)

Scientific Name of Source Organism

	Homo sapiens (10)
	Rattus norvegicus (8)
	Oryctolagus cuniculus (7)
	Paramagnetospirillum magnetotacticum (2)
	Ficedula albicollis (1)

Taxonomy

	Eukaryota (26)
	Bacteria (2)

Experimental Method

	ELECTRON MICROSCOPY (24)
	X-RAY DIFFRACTION (4)

Polymer Entity Type

Protein (28)

Refinement Resolution (Å)

	2.0 - 2.5 (1)
	2.5 - 3.0 (3)
	3.0 - 3.5 (6)
	3.5 - 4.0 (7)
	4.0 - 4.5 (9)
	> 4.5 (2)

Release Date

	2010 - 2014 (2)
	2015 - 2019 (15)
	2020 - 2024 (11)

Membrane Protein Annotation

	PDBTM (28)
	mpstruc (20)
	MemProtMD (18)
	OPM (17)

Symmetry Type

Cyclic (28)

SCOP Classification

	All beta proteins (2)
	Artifacts (2)
	Membrane and cell surface proteins and peptides (2)

AllSelected

1 to 25 of 28 Structures

Page 1 of 2

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3ZRS	Download File View File

X-ray crystal structure of a KirBac potassium channel highlights a mechanism of channel opening at the bundle-crossing gate.

Bavro, V.N., De Zorzi, R., Schmidt, M.R., Muniz, J.R.C., Zubcevic, L., Sansom, M.S.P., Venien-Bryan, C., Tucker, S.J.

(2012) Nat Struct Mol Biol 19: 158

Released	2012-01-11
Method	X-RAY DIFFRACTION 3.05 Å
Organisms	Paramagnetospirillum magnetotacticum
Macromolecule	ATP-SENSITIVE INWARD RECTIFIER POTASSIUM CHANNEL 10 (protein)
Unique Ligands	CL, K

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4LP8	Download File View File

A Novel Open-State Crystal Structure of the Prokaryotic Inward Rectifier KirBac3.1

Zubcevic, L., Bavro, V.N., Muniz, J.R.C., Schmidt, M.R., Wang, S., De Zorzi, R., Venien-Bryan, C., Sansom, M.S.P., Nichols, C.G., Tucker, S.J.

(2014) J Biological Chem 289: 143-151

Released	2013-11-20
Method	X-RAY DIFFRACTION 2.46 Å
Organisms	Paramagnetospirillum magnetotacticum
Macromolecule	Inward rectifier potassium channel Kirbac3.1 (protein)
Unique Ligands	CL, K, PEG

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5AN8	Download File View File

Cryo-electron microscopy structure of rabbit TRPV2 ion channel

Zubcevic, L., Herzik, M.A.J., Chung, B.C., Lander, G.C., Lee, S.Y.

(2016) Nat Struct Mol Biol 23: 180

Released	2015-12-23
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Oryctolagus cuniculus
Macromolecule	TRPV2 (protein)

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6BPQ	Download File View File

Structure of the cold- and menthol-sensing ion channel TRPM8

Yin, Y., Wu, M., Zubcevic, L., Borschel, W.F., Lander, G.C., Lee, S.-Y.

(2018) Science 359: 237-241

Released	2017-12-13
Method	ELECTRON MICROSCOPY 4.1 Å
Organisms	Ficedula albicollis
Macromolecule	Transient receptor potential cation channel subfamily M member 8 (protein)

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6BWJ	Download File View File

Crystal structure of the TRPV2 ion channel in complex with RTx

Zubcevic, L., Le, S., Yang, H., Lee, S.Y.

(2018) Nat Struct Mol Biol 25: 405-415

Released	2018-05-02
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Oryctolagus cuniculus
Macromolecule	Transient receptor potential cation channel subfamily V member 2 (protein)
Unique Ligands	6EU, CA

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6BWM	Download File View File

Crystal structure of the TRPV2 ion channel

Zubcevic, L., Le, S., Yang, H., Lee, S.Y.

(2018) Nat Struct Mol Biol 25: 405-415

Released	2018-05-02
Method	X-RAY DIFFRACTION 3.9 Å
Organisms	Oryctolagus cuniculus
Macromolecule	Transient receptor potential cation channel subfamily V member 2 (protein)
Unique Ligands	CA

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6MHO	Download File View File

Structure of the human TRPV3 channel in the apo conformation

Zubcevic, L., Herzik, M.A., Wu, M., Borschel, W.F., Hirschi, M., Song, A., Lander, G.C., Lee, S.Y.

(2018) Nat Commun 9: 4773-4773

Released	2018-10-03
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Homo sapiens
Macromolecule	Transient receptor potential cation channel subfamily V member 3 (protein)

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6MHS	Download File View File

Structure of the human TRPV3 channel in a putative sensitized conformation

Zubcevic, L., Herzik, M.A., Wu, M., Borschel, W.F., Hirschi, M., Song, A., Lander, G.C., Lee, S.Y.

(2018) Nat Commun 9: 4773-4773

Released	2018-10-03
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Homo sapiens
Macromolecule	Transient receptor potential cation channel subfamily V member 3 (protein)

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6MHV	Download File View File

Structure of human TRPV3 in the presence of 2-APB in C4 symmetry

Zubcevic, L., Herzik, M.A., Wu, M., Borschel, W.F., Hirschi, M., Song, A., Lander, G.C., Lee, S.Y.

(2018) Nat Commun 9: 4773-4773

Released	2018-10-03
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Homo sapiens
Macromolecule	Transient receptor potential cation channel subfamily V member 3 (protein)

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6MHW	Download File View File

Structure of human TRPV3 in the presence of 2-APB in C2 symmetry (1)

Zubcevic, L., Herzik, M.A., Wu, M., Borschel, W.F., Hirschi, M., Song, A., Lander, G.C., Lee, S.Y.

(2018) Nat Commun 9: 4773-4773

Released	2018-10-03
Method	ELECTRON MICROSCOPY 4 Å
Organisms	Homo sapiens
Macromolecule	Transient receptor potential cation channel subfamily V member 3 (protein)

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6MHX	Download File View File

Structure of human TRPV3 in the presence of 2-APB in C2 symmetry (2)

Zubcevic, L., Herzik, M.A., Wu, M., Borschel, W.F., Hirschi, M., Song, A., Lander, G.C., Lee, S.Y.

(2018) Nat Commun 9: 4773-4773

Released	2018-10-03
Method	ELECTRON MICROSCOPY 4 Å
Organisms	Homo sapiens
Macromolecule	Transient receptor potential cation channel subfamily V member 3 (protein)

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6OO3	Download File View File

Cryo-EM structure of the C4-symmetric TRPV2/RTx complex in amphipol resolved to 2.9 A

Zubcevic, L., Hsu, A.L., Borgnia, M.J., Lee, S.-Y.

(2019) Elife 8:

Released	2019-05-29
Method	ELECTRON MICROSCOPY 2.9 Å
Organisms	Oryctolagus cuniculus
Macromolecule	TRPV2 (protein)
Unique Ligands	6EU

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6OO4	Download File View File

Cryo-EM structure of the C2-symmetric TRPV2/RTx complex in amphipol resolved to 3.3 A

Zubcevic, L., Hsu, A.L., Borgnia, M.J., Lee, S.-Y.

(2019) Elife 8:

Released	2019-05-29
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Oryctolagus cuniculus
Macromolecule	TRPV2 (protein)
Unique Ligands	6EU

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6OO5	Download File View File

Cryo-EM structure of the C2-symmetric TRPV2/RTx complex in amphipol resolved to 4.2 A

Zubcevic, L., Hsu, A.L., Borgnia, M.J., Lee, S.-Y.

(2019) Elife 8:

Released	2019-05-29
Method	ELECTRON MICROSCOPY 4.2 Å
Organisms	Oryctolagus cuniculus
Macromolecule	TRPV2 (protein)
Unique Ligands	6EU

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6OO7	Download File View File

Cryo-EM structure of the C2-symmetric TRPV2/RTx complex in nanodiscs

Zubcevic, L., Hsu, A.L., Borgnia, M.J., Lee, S.-Y.

(2019) Elife 8:

Released	2019-05-29
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Oryctolagus cuniculus
Macromolecule	TRPV2 (protein)
Unique Ligands	6EU

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6OT2	Download File View File

Structure of the TRPV3 K169A sensitized mutant in apo form at 4.1 A resolution

Zubcevic, L., Borschel, W.F., Hsu, A.L., Borgnia, M.J., Lee, S.-Y.

(2019) Elife 8:

Released	2019-05-22
Method	ELECTRON MICROSCOPY 4.1 Å
Organisms	Homo sapiens
Macromolecule	Transient receptor potential cation channel subfamily V member 3 (protein)

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6OT5	Download File View File

Structure of the TRPV3 K169A sensitized mutant in the presence of 2-APB at 3.6 A resolution

Zubcevic, L., Borschel, W.F., Hsu, A.L., Borgnia, M.J., Lee, S.-Y.

(2019) Elife 8:

Released	2019-05-22
Method	ELECTRON MICROSCOPY 3.6 Å
Organisms	Homo sapiens
Macromolecule	Transient receptor potential cation channel subfamily V member 3,Transient receptor potential cation channel subfamily V member 3 (protein)
Unique Ligands	FZ4

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6PQO	Download File View File

Cryo-EM structure of the human TRPA1 ion channel in complex with the covalent agonist JT010

Suo, Y., Wang, Z., Zubcevic, L., Hsu, A.L., He, Q., Borgnia, M.J., Ji, R.-R., Lee, S.-Y.

(2020) Neuron 105: 882

Released	2020-01-08
Method	ELECTRON MICROSCOPY 2.88 Å
Organisms	Homo sapiens
Macromolecule	Transient receptor potential cation channel subfamily A member 1 (protein)
Unique Ligands	6OU, JT0, LBN
Unique branched monosaccharides	NAG

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6PQP	Download File View File

Cryo-EM structure of the human TRPA1 ion channel in complex with the covalent agonist BITC

Suo, Y., Wang, Z., Zubcevic, L., Hsu, A.L., He, Q., Borgnia, M.J., Ji, R.-R., Lee, S.-Y.

(2020) Neuron 105: 882

Released	2020-01-08
Method	ELECTRON MICROSCOPY 3.06 Å
Organisms	Homo sapiens
Macromolecule	Transient receptor potential cation channel subfamily A member 1 (protein)
Unique Ligands	6OU, 9BE, LBN
Unique branched monosaccharides	NAG

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6PQQ	Download File View File

Cryo-EM structure of human TRPA1 C621S mutant in the apo state

Suo, Y., Wang, Z., Zubcevic, L., Hsu, A.L., He, Q., Borgnia, M.J., Ji, R.-R., Lee, S.-Y.

(2020) Neuron 105: 882

Released	2020-01-08
Method	ELECTRON MICROSCOPY 2.81 Å
Organisms	Homo sapiens
Macromolecule	Transient receptor potential cation channel subfamily A member 1 (protein)
Unique Ligands	6OU, LBN

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8SL6	Download File View File

Cryo-EM structure of the rat TRPM5 channel in EGTA

Karuppan, S., Schrag, L.G., Jara-Oseguera, A., Zubcevic, L.

(2024) Proc Natl Acad Sci U S A 121: e2403333121-e2403333121

Released	2024-07-03
Method	ELECTRON MICROSCOPY 4.3 Å
Organisms	Rattus norvegicus
Macromolecule	Transient receptor potential cation channel subfamily M member 5 (protein)

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8SL8	Download File View File

Cryo-EM structure of the rat TRPM5 channel in trace calcium, trace-1

Karuppan, S., Schrag, L.G., Jara-Oseguera, A., Zubcevic, L.

(2024) Proc Natl Acad Sci U S A 121: e2403333121-e2403333121

Released	2024-07-03
Method	ELECTRON MICROSCOPY 4.2 Å
Organisms	Rattus norvegicus
Macromolecule	Transient receptor potential cation channel subfamily M member 5 (protein)

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8SLA	Download File View File

Cryo-EM structure of the rat TRPM5 channel in trace calcium, trace-2

Karuppan, S., Schrag, L.G., Jara-Oseguera, A., Zubcevic, L.

(2024) Proc Natl Acad Sci U S A 121: e2403333121-e2403333121

Released	2024-07-03
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Rattus norvegicus
Macromolecule	Transient receptor potential cation channel subfamily M member 5 (protein)

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8SLE	Download File View File

Cryo-EM structure of the rat TRPM5 channel in trace calcium, trace-3

Karuppan, S., Schrag, L.G., Jara-Oseguera, A., Zubcevic, L.

(2024) Proc Natl Acad Sci U S A 121: e2403333121-e2403333121

Released	2024-07-03
Method	ELECTRON MICROSCOPY 4.3 Å
Organisms	Rattus norvegicus
Macromolecule	Transient receptor potential cation channel subfamily M member 5 (protein)

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8SLI	Download File View File

Cryo-EM structure of the rat TRPM5 channel in 2mM calcium, high-1

Karuppan, S., Schrag, L.G., Jara-Oseguera, A., Zubcevic, L.

(2024) Proc Natl Acad Sci U S A 121: e2403333121-e2403333121

Released	2024-07-03
Method	ELECTRON MICROSCOPY 4.9 Å
Organisms	Rattus norvegicus
Macromolecule	Transient receptor potential cation channel subfamily M member 5 (protein)
Unique Ligands	CA