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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Walmsley, D.L."

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Search Summary

This query matches 616 Structures.

Refinements

Structure Determination Methodology

experimental (616)

Scientific Name of Source Organism

	Homo sapiens (198)
	Severe acute respiratory syndrome coronavirus 2 (111)
	Human immunodeficiency virus 1 (48)
	Cystovirus phi6 (32)
	Oryctolagus cuniculus (23)
	Bos taurus (17)
	Enterovirus A71 (17)
	Pseudomonas phage phi12 (16)
	synthetic construct (14)
	Mus musculus (13)

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Taxonomy

	Riboviria (398)
	Eukaryota (278)
	Bacteria (40)
	Varidnaviria (24)
	other sequences (14)
	Duplodnaviria (13)
	Archaea (5)
	Monodnaviria (3)
	Viruses incertae sedis (3)
	Eukaryota (eukaryotes) (1)

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Experimental Method

	X-RAY DIFFRACTION (501)
	ELECTRON MICROSCOPY (113)
	ELECTRON CRYSTALLOGRAPHY (1)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (612)
	DNA (14)
	RNA (6)

Refinement Resolution (Å)

	1.0 - 1.5 (24)
	1.5 - 2.0 (76)
	2.0 - 2.5 (152)
	2.5 - 3.0 (161)
	3.0 - 3.5 (98)
	3.5 - 4.0 (46)
	4.0 - 4.5 (24)
	> 4.5 (31)

Release Date

	1980 - 1984 (1)
	1985 - 1989 (1)
	1990 - 1994 (19)
	1995 - 1999 (62)
	2000 - 2004 (83)
	2005 - 2009 (79)
	2010 - 2014 (89)
	2015 - 2019 (98)
	2020 - 2024 (178)
	2025 - 2029 (6)

Enzyme Classification Name

	Transferases (142)
	Hydrolases (53)
	Oxidoreductases (6)
	Isomerases (3)
	Ligases (1)
	Lyases (1)

Membrane Protein Annotation

	PDBTM (6)
	mpstruc (6)
	MemProtMD (4)
	OPM (4)

Symmetry Type

	Asymmetric (355)
	Cyclic (163)
	Icosahedral (89)
	Dihedral (12)
	Tetrahedral (2)

SCOP Classification

	All beta proteins (142)
	Alpha and beta proteins (a/b) (99)
	Multi-domain proteins (alpha and beta) (77)
	Alpha and beta proteins (a+b) (68)
	Artifacts (33)
	Small proteins (18)
	Low resolution protein structures (3)
	All alpha proteins (7)
	Membrane and cell surface proteins and peptides (4)
	Peptides (1)

AllSelected

1 to 25 of 616 Structures

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1A1M \| pdb_00001a1m	Download File View File

MHC CLASS I MOLECULE B*5301 COMPLEXED WITH PEPTIDE TPYDINQML FROM GAG PROTEIN OF HIV2

Smith, K.J., Reid, S.W., Harlos, K., Mcmichael, A.J., Stuart, D.I., Bell, J.I., Jones, E.Y.

(1996) Immunity 4: 215-228

Released	1998-04-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens Human immunodeficiency virus 2
Macromolecule	Beta-2-microglobulin (protein) HLA class I histocompatibility antigen, BW-53 B*5301 alpha chain (protein) PEPTIDE TPYDINQML (protein)

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1A1N \| pdb_00001a1n	Download File View File

MHC CLASS I MOLECULE B*3501 COMPLEXED WITH PEPTIDE VPLRPMTY FROM THE NEF PROTEIN (75-82) OF HIV1

Smith, K.J., Reid, S.W., Stuart, D.I., Mcmichael, A.J., Jones, E.Y., Bell, J.I.

(1996) Immunity 4: 203-213

Released	1998-04-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Beta-2-microglobulin (protein) HLA class I histocompatibility antigen, BW-53 B*5301 alpha chain (protein) PEPTIDE VPLRPMTY (protein)

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1A1O \| pdb_00001a1o	Download File View File

MHC CLASS I MOLECULE B*5301 COMPLEXED WITH PEPTIDE LS6 (KPIVQYDNF) FROM THE MALARIA PARASITE P. FALCIPARUM

Smith, K.J., Reid, S.W., Harlos, K., Mcmichael, A.J., Stuart, D.I., Bell, J.I., Jones, E.Y.

(1996) Immunity 4: 215-228

Released	1998-04-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Beta-2-microglobulin (protein) HLA class I histocompatibility antigen, BW-53 B*5301 alpha chain (protein) PEPTIDE LS6 (KPIVQYDNF) (protein)

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1A4V \| pdb_00001a4v	Download File View File

ALPHA-LACTALBUMIN

Chandra, N., Acharya, K.R.

(1998) Biochemistry 37: 4767-4772

Released	1999-04-27
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	ALPHA-LACTALBUMIN (protein)
Unique Ligands	CA

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1A6S \| pdb_00001a6s	Download File View File

M-DOMAIN FROM GAG POLYPROTEIN OF ROUS SARCOMA VIRUS, NMR, 20 STRUCTURES

Mcdonnell, J.M., Fushman, D., Cahill, S.M., Zhou, W., Wolven, A., Wilson, C.B., Nelle, T.D., Resh, M.D., Wills, J., Cowburn, D.

(1998) J Mol Biology 279: 921-928

Released	1998-10-14
Method	SOLUTION NMR
Organisms	Rous sarcoma virus - Prague C
Macromolecule	GAG POLYPROTEIN (protein)

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1A8I \| pdb_00001a8i	Download File View File

SPIROHYDANTOIN INHIBITOR OF GLYCOGEN PHOSPHORYLASE

Gregoriou, M., Noble, M.E.M., Watson, K.A., Garman, E.F., Krulle, T.M., De La Fuente, C., Fleet, G.W.J., Oikonomakos, N.G., Johnson, L.N.

(1998) Protein Sci 7: 915-927

Released	1998-07-01
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Oryctolagus cuniculus
Macromolecule	GLYCOGEN PHOSPHORYLASE B (protein)
Unique Ligands	GLS

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1AGB \| pdb_00001agb	Download File View File

ANTAGONIST HIV-1 GAG PEPTIDES INDUCE STRUCTURAL CHANGES IN HLA B8-HIV-1 GAG PEPTIDE (GGRKKYKL-3R MUTATION)

Reid, S.W., Mcadam, S., Smith, K.J., Klenerman, P., O'Callaghan, C.A., Harlos, K., Jakobsen, B.K., Mcmichael, A.J., Bell, J., Stuart, D.I., Jones, E.Y.

(1996) J Exp Medicine 184: 2279-2286

Released	1997-06-16
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	B*0801 (protein) BETA-2 MICROGLOBULIN (protein) HIV-1 GAG PEPTIDE (GGRKKYKL - 3R MUTATION) (protein)

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1AGC \| pdb_00001agc	Download File View File

ANTAGONIST HIV-1 GAG PEPTIDES INDUCE STRUCTURAL CHANGES IN HLA B8-HIV-1 GAG PEPTIDE (GGKKKYQL-7Q MUTATION)

Reid, S.W., Mcadam, S., Smith, K.J., Klenerman, P., O'Callaghan, C.A., Harlos, K., Jakobsen, B.K., Mcmichael, A.J., Bell, J., Stuart, D.I., Jones, E.Y.

(1996) J Exp Medicine 184: 2279-2286

Released	1997-06-16
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	B*0801 (protein) BETA-2 MICROGLOBULIN (protein) HIV-1 GAG PEPTIDE (GGKKKYQL - 7Q MUTATION) (protein)

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1AGD \| pdb_00001agd	Download File View File

ANTAGONIST HIV-1 GAG PEPTIDES INDUCE STRUCTURAL CHANGES IN HLA B8-HIV-1 GAG PEPTIDE (GGKKKYKL-INDEX PEPTIDE)

Reid, S.W., Mcadam, S., Smith, K.J., Klenerman, P., O'Callaghan, C.A., Harlos, K., Jakobsen, B.K., Mcmichael, A.J., Bell, J., Stuart, D.I., Jones, E.Y.

(1996) J Exp Medicine 184: 2279-2286

Released	1997-06-16
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	B*0801 (protein) BETA-2 MICROGLOBULIN (protein) HIV-1 GAG PEPTIDE (GGKKKYKL - INDEX PEPTIDE) (protein)

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1AGE \| pdb_00001age	Download File View File

ANTAGONIST HIV-1 GAG PEPTIDES INDUCE STRUCTURAL CHANGES IN HLA B8-HIV-1 GAG PEPTIDE (GGKKKYRL-7R MUTATION)

Reid, S.W., Mcadam, S., Smith, K.J., Klenerman, P., O'Callaghan, C.A., Harlos, K., Jakobsen, B.K., Mcmichael, A.J., Bell, J., Stuart, D.I., Jones, E.Y.

(1996) J Exp Medicine 184: 2279-2286

Released	1997-06-16
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	B*0801 (protein) BETA-2 MICROGLOBULIN (protein) HIV-1 GAG PEPTIDE (GGKKKYRL - 7R MUTATION) (protein)

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1AGF \| pdb_00001agf	Download File View File

ANTAGONIST HIV-1 GAG PEPTIDES INDUCE STRUCTURAL CHANGES IN HLA B8-HIV-1 GAG PEPTIDE (GGKKRYKL-5R MUTATION)

Reid, S.W., Mcadam, S., Smith, K.J., Klenerman, P., O'Callaghan, C.A., Harlos, K., Jakobsen, B.K., Mcmichael, A.J., Bell, J., Stuart, D.I., Jones, E.Y.

(1996) J Exp Medicine 184: 2279-2286

Released	1997-06-16
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	B*0801 (protein) BETA-2 MICROGLOBULIN (protein) HIV-1 GAG PEPTIDE (GGKKRYKL - 5R MUTATION) (protein)

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1AHA \| pdb_00001aha	Download File View File

THE N-GLYCOSIDASE MECHANISM OF RIBOSOME-INACTIVATING PROTEINS IMPLIED BY CRYSTAL STRUCTURES OF ALPHA-MOMORCHARIN

Ren, J., Wang, Y., Dong, Y., Stuart, D.I.

(1994) Structure 2: 7-16

Released	1994-06-22
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Momordica charantia
Macromolecule	ALPHA-MOMORCHARIN (protein)
Unique Ligands	ADE

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1AHB \| pdb_00001ahb	Download File View File

THE N-GLYCOSIDASE MECHANISM OF RIBOSOME-INACTIVATING PROTEINS IMPLIED BY CRYSTAL STRUCTURES OF ALPHA-MOMORCHARIN

Ren, J., Wang, Y., Dong, Y., Stuart, D.I.

(1994) Structure 2: 7-16

Released	1994-06-22
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Momordica charantia
Macromolecule	ALPHA-MOMORCHARIN (protein)
Unique Ligands	FMP

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1AHC \| pdb_00001ahc	Download File View File

THE N-GLYCOSIDASE MECHANISM OF RIBOSOME-INACTIVATING PROTEINS IMPLIED BY CRYSTAL STRUCTURES OF ALPHA-MOMORCHARIN

Ren, J., Wang, Y., Dong, Y., Stuart, D.I.

(1994) Structure 2: 7-16

Released	1994-06-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Momordica charantia
Macromolecule	ALPHA-MOMORCHARIN (protein)

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1AKJ \| pdb_00001akj	Download File View File

COMPLEX OF THE HUMAN MHC CLASS I GLYCOPROTEIN HLA-A2 AND THE T CELL CORECEPTOR CD8

Tormo, J., Stuart, D.I., Jones, E.Y.

(1997) Nature 387: 630-634

Released	1997-09-17
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Homo sapiens Human immunodeficiency virus
Macromolecule	BETA 2-MICROGLOBULIN (protein) HIV REVERSE TRANSCRIPTASE EPITOPE (protein) MHC CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A*0201) (ALPHA CHAIN) (protein) T-CELL CORECEPTOR CD8 (protein)

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1ALC \| pdb_00001alc	Download File View File

REFINED STRUCTURE OF BABOON ALPHA-LACTALBUMIN AT 1.7 ANGSTROMS RESOLUTION. COMPARISON WITH C-TYPE LYSOZYME

Acharya, K.R., Stuart, D.I., Phillips, D.C.

(1989) J Mol Biology 208: 99-127

Released	1989-10-15
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Papio cynocephalus
Macromolecule	ALPHA-LACTALBUMIN (protein)
Unique Ligands	CA

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1AXR \| pdb_00001axr	Download File View File

COOPERATIVITY BETWEEN HYDROGEN-BONDING AND CHARGE-DIPOLE INTERACTIONS IN THE INHIBITION OF BETA-GLYCOSIDASES BY AZOLOPYRIDINES: EVIDENCE FROM A STUDY WITH GLYCOGEN PHOSPHORYLASE B

Oikonomakos, N.G., Heightman, T.D.

(1998) Helvetica Chim Acta 81: 853-864

Released	1998-01-28
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Oryctolagus cuniculus
Macromolecule	GLYCOGEN PHOSPHORYLASE (protein)
Unique Ligands	HTP, PLP, PO4

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1B6U \| pdb_00001b6u	Download File View File

CRYSTAL STRUCTURE OF THE HUMAN KILLER CELL INHIBITORY RECEPTOR (KIR2DL3) SPECIFIC FOR HLA-CW3 RELATED ALLELES

Maenaka, K., Juji, T., Stuart, D.I., Jones, E.Y.

(1999) Structure 7: 391-398

Released	1999-01-27
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	P58 KILLER CELL INHIBITORY RECEPTOR (protein)

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1B8K \| pdb_00001b8k	Download File View File

Neurotrophin-3 from Human

Robinson, R.C., Radziejewski, C., Stuart, D.I., Jones, E.Y., Choe, S.

(1999) Protein Sci 8: 2589-2597

Released	1999-02-09
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (NEUROTROPHIN-3) (protein)

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1B8M \| pdb_00001b8m	Download File View File

BRAIN DERIVED NEUROTROPHIC FACTOR, NEUROTROPHIN-4

Robinson, R.C., Radziejewski, C., Stuart, D.I., Jones, E.Y., Choe, S.

(1999) Protein Sci 8: 2589-2597

Released	1999-02-09
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (BRAIN DERIVED NEUROTROPHIC FACTOR) (protein) PROTEIN (NEUROTROPHIN-4) (protein)

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1B98 \| pdb_00001b98	Download File View File

NEUROTROPHIN 4 (HOMODIMER)

Robinson, R.C., Radziejewski, C., Stuart, D.I., Jones, E.Y., Choe, S.

(1999) Protein Sci 8: 2589-2597

Released	1999-02-26
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (NEUROTROPHIN-4) (protein)
Unique Ligands	CL

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1BBT \| pdb_00001bbt	Download File View File

METHODS USED IN THE STRUCTURE DETERMINATION OF FOOT AND MOUTH DISEASE VIRUS

Acharya, K.R., Fry, E.E., Logan, D.T., Stuart, D.I.

(1993) Acta Crystallogr A 49: 45-55

Released	1994-01-31
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Foot-and-mouth disease virus
Macromolecule	FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP1) (protein) FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP2) (protein) FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP3) (protein) FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP4) (protein)

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1BND \| pdb_00001bnd	Download File View File

STRUCTURE OF THE BRAIN-DERIVED NEUROTROPHIC FACTOR(SLASH)NEUROTROPHIN 3 HETERODIMER

Robinson, R.C., Radziejewski, C., Stuart, D.I., Jones, E.Y.

(1995) Biochemistry 34: 4139-4146

Released	1996-04-04
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	BRAIN DERIVED NEUROTROPHIC FACTOR (protein) NEUROTROPHIN 3 (protein)
Unique Ligands	IPA

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1BOY \| pdb_00001boy	Download File View File

EXTRACELLULAR REGION OF HUMAN TISSUE FACTOR

Boys, C.W.G., Tuddenham, E.G.D., Harlos, K.

(1994) Nature 370: 662-666

Released	1996-06-10
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	HUMAN TISSUE FACTOR (protein)

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1BX3 \| pdb_00001bx3	Download File View File

EFFECTS OF COMMONLY USED CRYOPROTECTANTS ON GLYCOGEN PHOSPHORYLASE ACTIVITY AND STRUCTURE

Tsitsanou, K.E., Oikonomakos, N.G., Zographos, S.E., Skamnaki, V.T., Gregoriou, M., Watson, K.A., Johnson, L.N., Fleet, G.W.J.

(1999) Protein Sci 8: 741-749

Released	1999-10-21
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Oryctolagus cuniculus
Macromolecule	PROTEIN (GLYCOGEN PHOSPHORYLASE B) (protein)
Unique Ligands	PLP

1 to 25 of 616 Structures

Page 1 of 25

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1A1M | pdb_00001a1m

1A1N | pdb_00001a1n

1A1O | pdb_00001a1o

1A4V | pdb_00001a4v

1A6S | pdb_00001a6s

1A8I | pdb_00001a8i

1AGB | pdb_00001agb

1AGC | pdb_00001agc

1AGD | pdb_00001agd

1AGE | pdb_00001age

1AGF | pdb_00001agf

1AHA | pdb_00001aha

1AHB | pdb_00001ahb

1AHC | pdb_00001ahc

1AKJ | pdb_00001akj

1ALC | pdb_00001alc

1AXR | pdb_00001axr

1B6U | pdb_00001b6u

1B8K | pdb_00001b8k

1B8M | pdb_00001b8m

1B98 | pdb_00001b98

1BBT | pdb_00001bbt

1BND | pdb_00001bnd

1BOY | pdb_00001boy

1BX3 | pdb_00001bx3