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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Wucherpfennig, K.W."

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Search Summary

This query matches 20 Structures.

Refinements

Structure Determination Methodology

experimental (20)

Scientific Name of Source Organism

	Homo sapiens (16)
	Mus musculus (4)
	synthetic construct (4)
	Herpesviridae sp. (1)
	Mammarenavirus juninense (1)
	Mammarenavirus machupoense (1)
	Staphylococcus aureus (1)

Taxonomy

	Eukaryota (20)
	other sequences (4)
	Riboviria (2)
	Bacteria (1)
	Duplodnaviria (1)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (16)
	SOLUTION NMR (4)

Polymer Entity Type

Protein (20)

Refinement Resolution (Å)

	2.0 - 2.5 (5)
	2.5 - 3.0 (5)
	3.0 - 3.5 (3)
	3.5 - 4.0 (3)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (1)
	2005 - 2009 (5)
	2010 - 2014 (10)
	2015 - 2019 (3)

Membrane Protein Annotation

	OPM (5)
	PDBTM (3)
	mpstruc (3)
	MemProtMD (2)

Symmetry Type

	Asymmetric (17)
	Cyclic (5)

SCOP Classification

	All beta proteins (10)
	Alpha and beta proteins (a+b) (9)
	Artifacts (2)

AllSelected

1 to 20 of 20 Structures

Page 1 of 1

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1BX2	Download File View File

CRYSTAL STRUCTURE OF HLA-DR2 (DRA0101,DRB11501) COMPLEXED WITH A PEPTIDE FROM HUMAN MYELIN BASIC PROTEIN

Smith, K.J., Pyrdol, J., Gauthier, L., Wiley, D.C., Wucherpfennig, K.

(1998) J Exp Medicine 188: 1511-1520

Released	1998-10-21
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (HLA-DR2) (protein)
Unique Ligands	NAG

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1JK8	Download File View File

Crystal structure of a human insulin peptide-HLA-DQ8 complex

Lee, K.H., Wucherpfennig, K.W., Wiley, D.C.

(2001) Nat Immunol 2: 501-507

Released	2001-08-22
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	MHC class II HLA-DQ8 (protein) insulin B peptide (protein)
Unique Ligands	NAG

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1YMM	Download File View File

TCR/HLA-DR2b/MBP-peptide complex

Hahn, M., Nicholson, M.J., Pyrdol, J., Wucherpfennig, K.W.

(2005) Nat Immunol 6: 490-496

Released	2005-05-03
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Homo sapiens
Macromolecule	HLA class II histocompatibility antigen, DR alpha chain (protein) HLA class II histocompatibility antigen, DR beta chain (protein) MBP peptide (protein) T cell receptor alpha chain (protein) T-cell receptor beta chain (protein)
Unique Ligands	NAG

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2BC4	Download File View File

Crystal structure of HLA-DM

Nicholson, M.J., Moradi, B., Seth, N.P., Xing, X., Cuny, G.D., Stein, R.L., Wucherpfennig, K.W.

(2006) J Immunol 176: 4208-4220

Released	2006-05-23
Method	X-RAY DIFFRACTION 2.27 Å
Organisms	Homo sapiens
Macromolecule	HLA class II histocompatibility antigen, DM alpha chain (protein) HLA class II histocompatibility antigen, DM beta chain (protein)
Unique Ligands	CL
Unique branched monosaccharides	BMA, NAG, NDG

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2HAC	Download File View File

Structure of Zeta-Zeta Transmembrane Dimer

Chou, J.J., Wucherpfennig, K.W., Schnell, J.R., Call, M.E.

(2006) Cell 127: 355-368

Released	2006-10-31
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	T-cell surface glycoprotein CD3 zeta chain (protein)

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2IJ0	Download File View File

Structural basis of T cell specificity and activation by the bacterial superantigen toxic shock syndrome toxin-1

Moza, B., Varma, A.K., Buonpane, R.A., Zhu, P., Herfst, C.A., Nicholson, M.J., Wilbuer, A.K., Nulifer, S., Wucherpfenning, K.W., McCormick, J.K., Kranz, D.M., Sundberg, E.J.

(2007) EMBO J 26: 1187-1197

Released	2007-02-20
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Homo sapiens Staphylococcus aureus
Macromolecule	Toxic shock syndrome toxin-1 (protein) penultimate affinity-matured variant of hVbeta 2.1, D10 (protein)

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2K4F	Download File View File

Mouse CD3epsilon Cytoplasmic Tail

Xu, C., Call, M.E., Schwieters, C.D., Schnell, J.R., Gagnon, E.E., Wucherpfennig, K.W., Chou, J.J.

(2008) Cell 135: 702-713

Released	2008-12-02
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	T-cell surface glycoprotein CD3 epsilon chain (protein)

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2L34	Download File View File

Structure of the DAP12 transmembrane homodimer

Call, M.E., Wucherpfennig, K.W., Chou, J.J.

(2010) Nat Immunol 11: 1023-1029

Released	2010-11-03
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	TYRO protein tyrosine kinase-binding protein (protein)

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2L35	Download File View File

Structure of the DAP12-NKG2C transmembrane heterotrimer

Call, M.E., Wucherpfennig, K.W., Chou, J.J.

(2010) Nat Immunol 11: 1023-1029

Released	2010-11-03
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	DAP12-NKG2C_TM (protein) TYRO protein tyrosine kinase-binding protein (protein)

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3PL6	Download File View File

Structure of Autoimmune TCR Hy.1B11 in complex with HLA-DQ1 and MBP 85-99

Sethi, D.K., Wucherpfennig, K.W.

(2011) J Exp Medicine 208: 91-102

Released	2010-12-22
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Homo sapiens
Macromolecule	MBP peptide / T-cell receptor beta chain chimera (protein) MHC class II HLA-DQ-alpha chain (protein) MHC class II HLA-DQ-beta chain (protein) T-cell receptor alpha chain (protein)
Unique Ligands	NAG

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4FQX	Download File View File

Crystal structure of HLA-DM bound to HLA-DR1

Sethi, D.K., Pos, W., Wucherpfennig, K.W.

(2012) Cell 151: 1557-1568

Released	2013-01-09
Method	X-RAY DIFFRACTION 2.599 Å
Organisms	Homo sapiens
Macromolecule	HLA class II histocompatibility antigen, DM alpha chain (protein) HLA class II histocompatibility antigen, DM beta chain (protein) HLA class II histocompatibility antigen, DR alpha chain (protein) HLA class II histocompatibility antigen, DRB1-1 beta chain (protein) Synthetic peptide (protein)
Unique branched monosaccharides	NAG

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4GBX	Download File View File

Crystal structure of an immune complex at pH 6.5

Sethi, D.K., Pos, W., Wucherpfennig, K.W.

(2012) Cell 151: 1557-1568

Released	2013-01-16
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	HLA class II histocompatibility antigen, DM alpha chain (protein) HLA class II histocompatibility antigen, DM beta chain (protein) HLA class II histocompatibility antigen, DR alpha chain (protein) HLA class II histocompatibility antigen, DRB1-1 beta chain (protein) synthetic peptide (protein)
Unique Ligands	NAG

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4GRL	Download File View File

Crystal structure of a autoimmune TCR-MHC complex

Sethi, D.K., Wucherpfennig, K.W.

(2013) Nat Commun 4: 2623-2623

Released	2013-11-06
Method	X-RAY DIFFRACTION 2.86 Å
Organisms	Homo sapiens
Macromolecule	MHC class II HLA-DQ-alpha chain (protein) MHC class II antigen (protein) TCR Hy.1B11 alpha chain (protein) TCR Hy.1B11 beta chain (protein)
Unique Ligands	NAG

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4MAY	Download File View File

Crystal structure of an immune complex

Sethi, D.K., Wucherpfennig, K.W.

(2013) Nat Commun 4: 2623-2623

Released	2013-10-23
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Herpesviridae sp. Homo sapiens
Macromolecule	HY.1B11 TCR alpha chain (protein) MHC class II HLA-DQ-alpha chain (protein) MHC class II antigen (protein) UL15 peptide-HY.1B11 TCR beta chain, chimeric construct (protein)
Unique Ligands	SO4

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4P2O	Download File View File

Crystal structure of the 2B4 TCR in complex with 2A/I-Ek

Birnbaum, M.E., Ozkan, E., Garcia, K.C.

(2014) Cell 157: 1073-1087

Released	2014-05-21
Method	X-RAY DIFFRACTION 2.603 Å
Organisms	Mus musculus synthetic construct
Macromolecule	2A peptide (protein) 2B4 T-cell receptor alpha chain (protein) 2B4 T-cell receptor beta chain (protein) H-2 class II histocompatibility antigen, E-K alpha chain (protein) MHC class II E-beta-k (protein)
Unique Ligands	NAG
Unique branched monosaccharides	FUC, NAG

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4P2Q	Download File View File

Crystal structure of the 5cc7 TCR in complex with 5c2/I-Ek

Birnbaum, M.E., Ozkan, E., Garcia, K.C.

(2014) Cell 157: 1073-1087

Released	2014-05-21
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Mus musculus synthetic construct
Macromolecule	5c2 peptide (protein) 5cc7 T-cell receptor alpha chain (protein) 5cc7 T-cell receptor beta chain (protein) H-2 class II histocompatibility antigen, E-K alpha chain (protein) MHC class II E-beta-k (protein)
Unique Ligands	NAG

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4P2R	Download File View File

Crystal structure of the 5cc7 TCR in complex with 5c1/I-Ek

Birnbaum, M.E., Ozkan, E., Garcia, K.C.

(2014) Cell 157: 1073-1087

Released	2014-05-21
Method	X-RAY DIFFRACTION 3.295 Å
Organisms	Mus musculus synthetic construct
Macromolecule	5c1 peptide (protein) 5cc7 T-cell receptor alpha chain (protein) 5cc7 T-cell receptor beta chain (protein) H-2 class II histocompatibility antigen, E-K alpha chain (protein) MHC class II E-beta-k (protein)
Unique Ligands	NAG

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5W1G	Download File View File

CR1-07 unliganded Fab

Raymond, D.D., Clark, L.E., Abraham, J.

(2018) Nat Commun 9: 1884-1884

Released	2018-05-30
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	CR1-07 Fab heavy chain (protein) CR1-07 Fab light chain (protein)

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5W1K	Download File View File

JUNV GP1 CR1-10 Fab CR1-28 Fab complex

Raymond, D.D., Clark, L.E., Abraham, J.

(2018) Nat Commun 9: 1884-1884

Released	2018-05-30
Method	X-RAY DIFFRACTION 3.99 Å
Organisms	Homo sapiens Mammarenavirus juninense
Macromolecule	CR1-10 Fab heavy chain (protein) CR1-10 Fab light chain (protein) CR1-28 Fab heavy chain (protein) CR1-28 Fab light chain (protein) Pre-glycoprotein polyprotein GP complex (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG

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5W1M	Download File View File

MACV GP1 CR1-07 Fab complex

Raymond, D.D., Clark, L.E., Abraham, J.

(2018) Nat Commun 9: 1884-1884

Released	2018-05-30
Method	X-RAY DIFFRACTION 3.91 Å
Organisms	Homo sapiens Mammarenavirus machupoense
Macromolecule	CR1-07 Fab heavy chain (protein) CR1-07 Fab light chain (protein) Pre-glycoprotein polyprotein GP complex (protein)
Unique Ligands	BMA, NAG
Unique branched monosaccharides	BMA, NAG