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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Zimmermann, I."

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Search Summary

This query matches 43 Structures.

Refinements

Structure Determination Methodology

experimental (43)

Scientific Name of Source Organism

	synthetic construct (15)
	Gloeobacter violaceus PCC 7421 (8)
	Dickeya dadantii 3937 (5)
	Escherichia coli O157:H7 (5)
	Severe acute respiratory syndrome coronavirus 2 (5)
	Thermotoga maritima MSB8 (4)
	Escherichia coli K-12 (3)
	Gallus gallus (3)
	Homo sapiens (3)
	Lama glama (3)

More...

Taxonomy

	Bacteria (32)
	other sequences (15)
	Eukaryota (10)
	Riboviria (5)
	Archaea (2)
	unclassified sequences (2)

Experimental Method

	X-RAY DIFFRACTION (37)
	ELECTRON MICROSCOPY (6)

Polymer Entity Type

Protein (43)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (5)
	2.0 - 2.5 (4)
	2.5 - 3.0 (4)
	3.0 - 3.5 (15)
	3.5 - 4.0 (10)
	4.0 - 4.5 (2)
	> 4.5 (2)

Release Date

	2005 - 2009 (1)
	2010 - 2014 (10)
	2015 - 2019 (19)
	2020 - 2024 (13)

Enzyme Classification Name

Hydrolases (1)

Membrane Protein Annotation

	PDBTM (32)
	MemProtMD (28)
	mpstruc (24)
	OPM (16)

Symmetry Type

	Asymmetric (23)
	Cyclic (21)

SCOP Classification

All beta proteins (3)

AllSelected

1 to 25 of 43 Structures

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2XQ3	Download File View File

Pentameric ligand gated ion channel GLIC in complex with Br-lidocaine

Hilf, R.J.C., Bertozzi, C., Zimmermann, I., Reiter, A., Trauner, D., Dutzler, R.

(2010) Nat Struct Mol Biol 17: 1330

Released	2010-11-10
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Gloeobacter violaceus PCC 7421
Macromolecule	GLR4197 PROTEIN (protein)
Unique Ligands	BR

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2XQ4	Download File View File

Pentameric ligand gated ion channel GLIC in complex with tetramethylarsonium (TMAs)

Hilf, R.J.C., Bertozzi, C., Zimmermann, I., Reiter, A., Trauner, D., Dutzler, R.

(2010) Nat Struct Mol Biol 17: 1330

Released	2010-11-10
Method	X-RAY DIFFRACTION 3.6 Å
Organisms	Gloeobacter violaceus PCC 7421
Macromolecule	GLR4197 PROTEIN (protein)
Unique Ligands	ARS

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2XQ5	Download File View File

Pentameric ligand gated ion channel GLIC in complex with tetraethylarsonium (TEAs)

Hilf, R.J.C., Bertozzi, C., Zimmermann, I., Reiter, A., Trauner, D., Dutzler, R.

(2010) Nat Struct Mol Biol 17: 1330

Released	2010-11-10
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Gloeobacter violaceus PCC 7421
Macromolecule	GLR4197 PROTEIN (protein)
Unique Ligands	ARS

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2XQ6	Download File View File

Pentameric ligand gated ion channel GLIC in complex with cesium ion (Cs+)

Hilf, R.J.C., Bertozzi, C., Zimmermann, I., Reiter, A., Trauner, D., Dutzler, R.

(2010) Nat Struct Mol Biol 17: 1330

Released	2010-11-10
Method	X-RAY DIFFRACTION 3.7 Å
Organisms	Gloeobacter violaceus PCC 7421
Macromolecule	GLR4197 PROTEIN (protein)
Unique Ligands	CS

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2XQ7	Download File View File

Pentameric ligand gated ion channel GLIC in complex with cadmium ion (Cd2+)

Hilf, R.J.C., Bertozzi, C., Zimmermann, I., Reiter, A., Trauner, D., Dutzler, R.

(2010) Nat Struct Mol Biol 17: 1330

Released	2010-11-10
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Gloeobacter violaceus PCC 7421
Macromolecule	GLR4197 PROTEIN (protein)
Unique Ligands	CD

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2XQ8	Download File View File

Pentameric ligand gated ion channel GLIC in complex with zinc ion (Zn2+)

Hilf, R.J.C., Bertozzi, C., Zimmermann, I., Reiter, A., Trauner, D., Dutzler, R.

(2010) Nat Struct Mol Biol 17: 1330

Released	2010-11-10
Method	X-RAY DIFFRACTION 3.6 Å
Organisms	Gloeobacter violaceus PCC 7421
Macromolecule	GLR4197 PROTEIN (protein)
Unique Ligands	ZN

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2XQ9	Download File View File

Pentameric ligand gated ion channel GLIC mutant E221A in complex with tetraethylarsonium (TEAs)

Hilf, R.J.C., Bertozzi, C., Zimmermann, I., Reiter, A., Trauner, D., Dutzler, R.

(2010) Nat Struct Mol Biol 17: 1330

Released	2010-11-10
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Gloeobacter violaceus PCC 7421
Macromolecule	GLR4197 PROTEIN (protein)
Unique Ligands	ARS

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2XQA	Download File View File

Pentameric ligand gated ion channel GLIC in complex with tetrabutylantimony (TBSb)

Hilf, R.J.C., Bertozzi, C., Zimmermann, I., Reiter, A., Trauner, D., Dutzler, R.

(2010) Nat Struct Mol Biol 17: 1330

Released	2010-11-10
Method	X-RAY DIFFRACTION 3.7 Å
Organisms	Gloeobacter violaceus PCC 7421
Macromolecule	GLR4197 PROTEIN (protein)
Unique Ligands	SB

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2YKS	Download File View File

PENTAMERIC LIGAND GATED ION CHANNEL ELIC MUTANT F246A

Zimmermann, I., Dutzler, R.

(2011) PLoS Biol 9: 1101

Released	2011-07-06
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Dickeya chrysanthemi
Macromolecule	CYS-LOOP LIGAND-GATED ION CHANNEL (protein)

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2YN6	Download File View File

Pentameric Ligand-Gated Ion Channel ELIC in Complex with Barium

Zimmermann, I., Marabelli, A., Bertozzi, C., Sivilotti, L.G., Dutzler, R.

(2012) PLoS Biol 10: 1429

Released	2012-12-12
Method	X-RAY DIFFRACTION 3.31 Å
Organisms	Dickeya dadantii 3937
Macromolecule	PENTAMERIC LIGAND-GATED ION CHANNEL ELIC (protein)
Unique Ligands	BA

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3G40	Download File View File

Crystal structure of the cytoplasmic domain of a prokaryotic cation chloride cotransporter

Warmuth, S., Zimmermann, I., Dutzler, R.

(2009) Structure 17: 538-546

Released	2009-04-28
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Methanosarcina acetivorans
Macromolecule	Na-K-Cl cotransporter (protein)

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5HEG	Download File View File

Pentameric ligand-gated ion channel GLIC mutant P246G

Bertozzi, C., Hilf, R.J.C., Dtuzler, R.

(2016) PLoS Biol 14: e1002393-e1002393

Released	2016-03-02
Method	X-RAY DIFFRACTION 3.214 Å
Organisms	Gloeobacter violaceus
Macromolecule	Proton-gated ion channel (protein)

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5HEH	Download File View File

Pentameric ligand-gated ion channel GLIC mutant P246A

Bertozzi, C., Dutzler, R.

(2016) PLoS Biol 14: e1002393-e1002393

Released	2016-03-02
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Gloeobacter violaceus
Macromolecule	Proton-gated ion channel (protein)

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5HEJ	Download File View File

Pentameric ligand-gated ion channel ELIC mutant F116A

Bertozzi, C., Dutzler, R.

(2016) PLoS Biol 14: e1002393-e1002393

Released	2016-03-02
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Dickeya dadantii 3937
Macromolecule	Gamma-aminobutyric-acid receptor subunit beta-1 (protein)

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5HEO	Download File View File

Pentameric ligand-gated ion channel ELIC mutant P254G

Bertozzi, C., Dutzler, R.

(2016) PLoS Biol 14: e1002393-e1002393

Released	2016-03-02
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Dickeya dadantii 3937
Macromolecule	Gamma-aminobutyric-acid receptor subunit beta-1 (protein)

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5HEU	Download File View File

Pentameric ligand-gated ion channel ELIC mutant A257Y

Bertozzi, C., Dutzler, R.

(2016) PLoS Biol 14: e1002393-e1002393

Released	2016-03-02
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Dickeya dadantii 3937
Macromolecule	Gamma-aminobutyric-acid receptor subunit beta-1 (protein)

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5HEW	Download File View File

Pentameric ligand-gated ion channel ELIC mutant T28D

Engeler, S., Dutzler, R.

(2016) PLoS Biol 14: e1002393-e1002393

Released	2016-03-02
Method	X-RAY DIFFRACTION 4.5 Å
Organisms	Dickeya dadantii 3937
Macromolecule	Gamma-aminobutyric-acid receptor subunit beta-1 (protein)

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5M13	Download File View File

Synthetic nanobody in complex with MBP

Zimmermann, I., Egloff, P., Seeger, M.A.

(2018) Elife 7:

Released	2017-11-15
Method	X-RAY DIFFRACTION 1.372 Å
Organisms	Escherichia coli K-12 synthetic construct
Macromolecule	Maltose-binding periplasmic protein (protein) synthetic Nanobody L2_C06 (a-MBP#2) (protein)
Unique Ligands	EDO

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5M14	Download File View File

Synthetic nanobody in complex with MBP

Zimmermann, I., Egloff, P., Seeger, M.A.

(2018) Elife 7:

Released	2017-11-15
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Escherichia coli K-12 synthetic construct
Macromolecule	Maltose-binding periplasmic protein (protein) synthetic Nanobody L2_G11 (a-MBP#2) (protein)

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5M15	Download File View File

Synthetic nanobody in complex with MBP

Zimmermann, I., Egloff, P., Seeger, M.A.

(2018) Elife 7:

Released	2017-11-15
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli K-12 synthetic construct
Macromolecule	Maltose-binding periplasmic protein (protein) Synthetic nanobody L2_D09, (a-MBP#3) (protein)

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6I6B	Download File View File

Crystal structure of the KDEL receptor in the peptide free state.

Braeuer, P., Newstead, S.

(2019) Science 363: 1103-1107

Released	2019-02-27
Method	X-RAY DIFFRACTION 2.59 Å
Organisms	Gallus gallus
Macromolecule	ER lumen protein-retaining receptor 2 (protein)
Unique Ligands	OLC

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6I6H	Download File View File

Crystal structure of the KDEL receptor in the peptide bound state

Braeuer, P., Newstead, S.

(2019) Science 363: 1103-1107

Released	2019-02-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Gallus gallus Homo sapiens
Macromolecule	AEKDEL peptide (protein) ER lumen protein-retaining receptor 2 (protein)
Unique Ligands	OLC

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6I6J	Download File View File

Crystal structure of the KDEL receptor bound to synthetic nanobody.

Braeuer, P., Newstead, S.

(2019) Science 363: 1103-1107

Released	2019-02-27
Method	X-RAY DIFFRACTION 2.23 Å
Organisms	Gallus gallus synthetic construct
Macromolecule	ER lumen protein-retaining receptor 2 (protein) Sybody (protein)
Unique Ligands	OLC

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6QGW	Download File View File

Crystal structure of E.coli BamA beta-barrel in complex with nanobody E6

Hartmann, J.-B., Kaur, H., Jakob, R.P., Zahn, M., Zimmermann, I., Seeger, M., Maier, T., Hiller, S.

(2019) J Biomol NMR 73: 375-384

Released	2019-06-26
Method	X-RAY DIFFRACTION 1.938 Å
Organisms	Escherichia coli O157:H7 Lama glama
Macromolecule	NanoE6 (protein) Outer membrane protein assembly factor BamA (protein)
Unique Ligands	C8E

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6QGX	Download File View File

Crystal structure of E.coli BamA beta-barrel in complex with nanobody F7

Hartmann, J.-B., Kaur, H., Jakob, R.P., Zahn, M., Zimmermann, I., Seeger, M., Maier, T., Hiller, S.

(2019) J Biomol NMR 73: 375-384

Released	2019-06-26
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli O157:H7 Lama glama
Macromolecule	NanoF7 (protein) Outer membrane protein assembly factor BamA (protein)
Unique Ligands	C8E