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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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Search Summary

This query matches 90 Structures.

Refinements

Structure Determination Methodology

experimental (90)

Scientific Name of Source Organism

Klebsiella pneumoniae (90)

Taxonomy

Bacteria (90)

Experimental Method

X-RAY DIFFRACTION (90)

Polymer Entity Type

Protein (90)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (49)
	2.0 - 2.5 (31)
	2.5 - 3.0 (8)
	3.0 - 3.5 (1)

Release Date

	2010 - 2014 (1)
	2015 - 2019 (61)
	2020 - 2024 (28)

Enzyme Classification Name

Hydrolases (90)

Symmetry Type

	Asymmetric (42)
	Cyclic (52)

SCOP Classification

	Multi-domain proteins (alpha and beta) (68)
	Artifacts (5)

AllSelected

1 to 25 of 90 Structures

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4S2J \| pdb_00004s2j	Download File View File

OXA-48 in complex with Avibactam at pH 6.5

King, D.T., Strynadka, N.C.J.

(2015) ACS Infect Dis 1: 175-184

Released	2015-02-25
Method	X-RAY DIFFRACTION 2.54 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	NXL

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4S2K \| pdb_00004s2k	Download File View File

OXA-48 in complex with Avibactam at pH 7.5

King, D.T., Strynadka, N.C.J.

(2015) ACS Infect Dis 1: 175-184

Released	2015-02-25
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	NXL

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4S2N \| pdb_00004s2n	Download File View File

OXA-48 in complex with Avibactam at pH 8.5

King, D.T., Strynadka, N.C.J.

(2015) ACS Infect Dis 1: 175-184

Released	2015-02-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	NXL

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4S2P \| pdb_00004s2p	Download File View File

Crystal structure of unbound OXA-48

King, D.T., Strynadka, N.C.J.

(2015) ACS Infect Dis 1: 175-184

Released	2015-02-25
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)

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4WMC \| pdb_00004wmc	Download File View File

OXA-48 covalent complex with Avibactam inhibitor

Mangani, S., Benvenuti, M., Docquier, J.D.

(2015) ACS Chem Biol 10: 591-600

Released	2014-12-03
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	CO2, NXL

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5DTK \| pdb_00005dtk	Download File View File

Fragments bound to the OXA-48 beta-lactamase: Compound 17

Lund, B.A., Christopeit, T., Leiros, H.-K.S.

(2016) J Med Chem 59: 5542-5554

Released	2016-05-25
Method	X-RAY DIFFRACTION 1.60000241571 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	5F3, CL, EDO

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5DTS \| pdb_00005dts	Download File View File

Fragments bound to the OXA-48 beta-lactamase: Compound 2

Lund, B.A., Christopeit, T., Leiros, H.-K.S.

(2016) J Med Chem 59: 5542-5554

Released	2016-05-25
Method	X-RAY DIFFRACTION 1.94015871727 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	5F8, CL

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5DTT \| pdb_00005dtt	Download File View File

Fragments bound to the OXA-48 beta-lactamase: Compound 3

Lund, B.A., Christopeit, T., Leiros, H.-K.S.

(2016) J Med Chem 59: 5542-5554

Released	2016-05-25
Method	X-RAY DIFFRACTION 2.10000527 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	5F5, CL, EDO

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5DVA \| pdb_00005dva	Download File View File

Fragments bound to the OXA-48 beta-lactamase: Compound 1

Lund, B.A., Christopeit, T., Leiros, H.-K.S.

(2016) J Med Chem 59: 5542-5554

Released	2016-06-01
Method	X-RAY DIFFRACTION 2.50003891197 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	5FL, CL

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5FAQ \| pdb_00005faq	Download File View File

OXA-48 in complex with FPI-1465

King, A.M., King, D.T., French, S., Brouillette, E., Asli, A., Alexander, A.N., Vuckovic, M., Maiti, S.N., Parr, T.R., Brown, E.D., Malouin, F., Strynadka, N.C.J., Wright, G.D.

(2016) ACS Chem Biol 11: 864-868

Released	2016-01-20
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	5VW, CD, CL, CO

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5FAS \| pdb_00005fas	Download File View File

OXA-48 in complex with FPI-1523

King, A.M., King, D.T., French, S., Brouillette, E., Asli, A., Alexander, A.N., Vuckovic, M., Maiti, S.N., Parr, T.R., Brown, E.D., Malouin, F., Strynadka, N.C.J., Wright, G.D.

(2016) ACS Chem Biol 11: 864-868

Released	2016-01-20
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	5VR, CD, CL, CO

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5FAT \| pdb_00005fat	Download File View File

OXA-48 in complex with FPI-1602

King, A.M., King, D.T., French, S., Brouillette, E., Asli, A., Alexander, A.N., Vuckovic, M., Maiti, S.N., Parr, T.R., Brown, E.D., Malouin, F., Strynadka, N.C.J., Wright, G.D.

(2016) ACS Chem Biol 11: 864-868

Released	2016-01-20
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	602, CD, CL, CO

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5HAP \| pdb_00005hap	Download File View File

OXA-48 beta-lactamase - S70A mutant

Stojanoski, V., Adamski, C.J., Hu, L., Mehta, S.C., Sankaran, B., Prasad, B.V.V., Palzkill, T.G.

(2016) Biochemistry 55: 2479-2490

Released	2016-09-07
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	1PE, CL, EDO, MPD, NA, PEG, PG4, PGE

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5HAQ \| pdb_00005haq	Download File View File

OXa-48 beta-lactamase mutant - S70G

Stojanoski, V., Adamski, C.J., Hu, L., Mehta, S.C., Sankaran, B., Prasad, B.V.V., Palzkill, T.G.

(2016) Biochemistry 55: 2479-2490

Released	2016-09-07
Method	X-RAY DIFFRACTION 2.14 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	CD, FMT

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5OFT \| pdb_00005oft	Download File View File

Structural basis for OXA-48 dimerization

Lund, B.A., Nesheim, B.H.B., Leiros, H.K.S.

(2018) FEBS J 285: 4214-4228

Released	2018-08-01
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)

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5QA4 \| pdb_00005qa4	Download File View File

OXA-48 IN COMPLEX WITH COMPOUND 3a

Lund, B.A.

(2018) Eur J Med Chem 145: 634-648

Released	2018-01-10
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	CL, EDO, TI7

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5QA5 \| pdb_00005qa5	Download File View File

OXA-48 IN COMPLEX WITH COMPOUND 3b

Lund, B.A., Leiros, H.K.S.

(2018) Eur J Med Chem 145: 634-648

Released	2018-01-10
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	CL, EDO, L5D

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5QA6 \| pdb_00005qa6	Download File View File

OXA-48 IN COMPLEX WITH COMPOUND 4a

Lund, B.A., Leiros, H.K.S.

(2018) Eur J Med Chem 145: 634-648

Released	2018-01-10
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	AUV, CL, EDO

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5QA7 \| pdb_00005qa7	Download File View File

OXA-48 IN COMPLEX WITH COMPOUND 4b

Lund, B.A., Leiros, H.K.S.

(2018) Eur J Med Chem 145: 634-648

Released	2018-01-10
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	CL, EDO, IQQ

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5QA8 \| pdb_00005qa8	Download File View File

OXA-48 IN COMPLEX WITH COMPOUND 4c

Lund, B.A., Leiros, H.K.S.

(2018) Eur J Med Chem 145: 634-648

Released	2018-01-10
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	CL, JSX

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5QA9 \| pdb_00005qa9	Download File View File

OXA-48 IN COMPLEX WITH COMPOUND 5

Lund, B.A., Leiros, H.K.S.

(2018) Eur J Med Chem 145: 634-648

Released	2018-01-10
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	CL, EDO, QKU

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5QAA \| pdb_00005qaa	Download File View File

OXA-48 IN COMPLEX WITH COMPOUND 6a

Lund, B.A., Leiros, H.K.S.

(2018) Eur J Med Chem 145: 634-648

Released	2018-01-10
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	CL, EAJ, EDO

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5QAB \| pdb_00005qab	Download File View File

OXA-48 IN COMPLEX WITH COMPOUND 6b

Lund, B.A., Leiros, H.K.S.

(2018) Eur J Med Chem 145: 634-648

Released	2018-01-10
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	CL, EDO, XEV

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5QAC \| pdb_00005qac	Download File View File

OXA-48 IN COMPLEX WITH COMPOUND 6c

Lund, B.A., Leiros, H.K.S.

(2018) Eur J Med Chem 145: 634-648

Released	2018-01-10
Method	X-RAY DIFFRACTION 2 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	CL, EDO, U4J

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5QAD \| pdb_00005qad	Download File View File

OXA-48 IN COMPLEX WITH COMPOUND 8a

Lund, B.A., Leiros, H.K.S.

(2018) Eur J Med Chem 145: 634-648

Released	2018-01-10
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase (protein)
Unique Ligands	CL, EDO, WVV

1 to 25 of 90 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

4S2J | pdb_00004s2j

4S2K | pdb_00004s2k

4S2N | pdb_00004s2n

4S2P | pdb_00004s2p

4WMC | pdb_00004wmc

5DTK | pdb_00005dtk

5DTS | pdb_00005dts

5DTT | pdb_00005dtt

5DVA | pdb_00005dva

5FAQ | pdb_00005faq

5FAS | pdb_00005fas

5FAT | pdb_00005fat

5HAP | pdb_00005hap

5HAQ | pdb_00005haq

5OFT | pdb_00005oft

5QA4 | pdb_00005qa4

5QA5 | pdb_00005qa5

5QA6 | pdb_00005qa6

5QA7 | pdb_00005qa7

5QA8 | pdb_00005qa8

5QA9 | pdb_00005qa9

5QAA | pdb_00005qaa

5QAB | pdb_00005qab

5QAC | pdb_00005qac

5QAD | pdb_00005qad