RCSB PDB: Search

1D63 \| pdb_00001d63	Download File View File

CRYSTAL STRUCTURE OF A BERENIL-D(CGCAAATTTGCG) COMPLEX; AN EXAMPLE OF DRUG-DNA RECOGNITION BASED ON SEQUENCE-DEPENDENT STRUCTURAL FEATURES

Brown, D.G., Sanderson, M.R., Garman, E., Neidle, S.

(1992) J Mol Biology 226: 481-490

Released	1993-01-15
Method	X-RAY DIFFRACTION 2 Å
Macromolecule	DNA (5'-D(CPGPCPAPAPAPTPTPTPGPCPG)-3') (nucleic acid)
Unique Ligands	BRN, MG

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1D65 \| pdb_00001d65	Download File View File

MOLECULAR STRUCTURE OF THE B-DNA DODECAMER D(CGCAAATTTGCG)2; AN EXAMINATION OF PROPELLER TWIST AND MINOR-GROOVE WATER STRUCTURE AT 2.2 ANGSTROMS RESOLUTION

Edwards, K.J., Brown, D.G., Spink, N., Neidle, S.

(1992) J Mol Biology 226: 1161-1173

Released	1993-01-15
Method	X-RAY DIFFRACTION 2.2 Å
Macromolecule	DNA (5'-D(CPGPCPAPAPAPTPTPTPGPCPG)-3') (nucleic acid)

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1KI2 \| pdb_00001ki2	Download File View File

CRYSTAL STRUCTURE OF THYMIDINE KINASE FROM HERPES SIMPLEX VIRUS TYPE I COMPLEXED WITH GANCICLOVIR

Champness, J.N., Bennett, M.S., Wien, F., Brown, D.G., Visse, R., Sandhu, G., Davies, A., Rizkallah, P.J., Melitz, C., Summers, W.C., Sanderson, M.R.

(1998) Proteins 32: 350-361

Released	1998-12-02
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Human alphaherpesvirus 1 strain 17
Macromolecule	THYMIDINE KINASE (protein)
Unique Ligands	GA2, SO4

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1KIM \| pdb_00001kim	Download File View File

CRYSTAL STRUCTURE OF THYMIDINE KINASE FROM HERPES SIMPLEX VIRUS TYPE I COMPLEXED WITH DEOXYTHYMIDINE

Champness, J.N., Bennett, M.S., Wien, F., Brown, D.G., Visse, R., Sandhu, G., Davies, A., Rizkallah, P.J., Melitz, C., Summers, W.C., Sanderson, M.R.

(1998) Proteins 32: 350-361

Released	1998-05-20
Method	X-RAY DIFFRACTION 2.14 Å
Organisms	Human alphaherpesvirus 1 strain 17
Macromolecule	THYMIDINE KINASE (protein)
Unique Ligands	SO4, THM

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295D \| pdb_0000295d	Download File View File

CRYSTAL AND SOLUTION STRUCTURES OF THE OLIGONUCLEOTIDE D(ATGCGCAT)2: A COMBINED X-RAY AND NMR STUDY

Clark, G.R., Brown, D.G., Sanderson, M.R., Chwalinski, T., Neidle, S., Veal, J.M., Jones, R.L., Wilson, W.D., Zon, G., Garman, E., Stuart, D.I.

(1990) Nucleic Acids Res 18: 5521-5528

Released	1996-12-04
Method	X-RAY DIFFRACTION 1.5 Å
Macromolecule	DNA (5'-D(APTPGPCPGPCPAPT)-3') (nucleic acid)

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296D \| pdb_0000296d	Download File View File

SEQUENCE-DEPENDENT EFFECTS IN DRUG-DNA INTERACTION: THE CRYSTAL STRUCTURE OF HOECHST 33258 BOUND TO THE D(CGCAAATTTGCG)2 DUPLEX

Spink, N., Brown, D.G., Skelly, J.V., Neidle, S.

(1994) Nucleic Acids Res 22: 1607-1612

Released	1996-12-04
Method	X-RAY DIFFRACTION 2.25 Å
Macromolecule	DNA (5'-D(CPGPCPAPAPAPTPTPTPGPCPG)-3') (nucleic acid)
Unique Ligands	HT

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2BTZ \| pdb_00002btz	Download File View File

crystal structures of human pyruvate dehydrogenase kinase 2 containing physiological and synthetic ligands

Knoechel, T.R., Tucker, A.D., Robinson, C.M., Phillips, C., Taylor, W., Bungay, P.J., Kasten, S.A., Roche, T.E., Brown, D.G.

(2006) Biochemistry 45: 402

Released	2006-02-02
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	PYRUVATE DEHYDROGENASE KINASE ISOENZYME 2 (protein)

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2BU2 \| pdb_00002bu2	Download File View File

crystal structures of human pyruvate dehydrogenase kinase 2 containing physiological and synthetic ligands

Knoechel, T.R., Tucker, A.D., Robinson, C.M., Phillips, C., Taylor, W., Bungay, P.J., Kasten, S.A., Roche, T.E., Brown, D.G.

(2006) Biochemistry 45: 402

Released	2006-02-02
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	PYRUVATE DEHYDROGENSAE KINASE ISOENZYME 2 (protein)
Unique Ligands	ATP, MG, TF1

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2BU5 \| pdb_00002bu5	Download File View File

crystal structures of human pyruvate dehydrogenase kinase 2 containing physiological and synthetic ligands

Knoechel, T.R., Tucker, A.D., Robinson, C.M., Phillips, C., Taylor, W., Bungay, P.J., Kasten, S.A., Roche, T.E., Brown, D.G.

(2006) Biochemistry 45: 402

Released	2006-02-02
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Homo sapiens
Macromolecule	PYRUVATE DEHYDROGENASE KINASE ISOENZYME 2 (protein)
Unique Ligands	TF1

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2BU6 \| pdb_00002bu6	Download File View File

crystal structures of human pyruvate dehydrogenase kinase 2 containing physiological and synthetic ligands

Knoechel, T.R., Tucker, A.D., Robinson, C.M., Phillips, C., Taylor, W., Bungay, P.J., Kasten, S.A., Roche, T.E., Brown, D.G.

(2006) Biochemistry 45: 402

Released	2006-02-02
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	PYRUVATE DEHYDROGENASE KINASE ISOENZYME 2 (protein)
Unique Ligands	TF2

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2BU7 \| pdb_00002bu7	Download File View File

crystal structures of human pyruvate dehydrogenase kinase 2 containing physiological and synthetic ligands

Knoechel, T.R., Tucker, A.D., Robinson, C.M., Phillips, C., Taylor, W., Bungay, P.J., Kasten, S.A., Roche, T.E., Brown, D.G.

(2006) Biochemistry 45: 402

Released	2006-02-02
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	PYRUVATE DEHYDROGENASE KINASE ISOENZYME 2 (protein)
Unique Ligands	TF3

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2BU8 \| pdb_00002bu8	Download File View File

crystal structures of human pyruvate dehydrogenase kinase 2 containing physiological and synthetic ligands

Knoechel, T.R., Tucker, A.D., Robinson, C.M., Phillips, C., Taylor, W., Bungay, P.J., Kasten, S.A., Roche, T.E., Brown, D.G.

(2006) Biochemistry 45: 402

Released	2006-02-02
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	PYRUVATE DEHYDROGENASE KINASE ISOENZYME 2 (protein)
Unique Ligands	ADP, MG, TF4

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2CHM \| pdb_00002chm	Download File View File

Crystal structure of N2 substituted pyrazolo pyrimidinones - a flipped binding mode in PDE5

Allerton, C.M.N., Barber, C.G., Beaumont, K.C., Brown, D.G., Cole, S.M., Ellis, D., Lane, C.A.L., Maw, G.N., Mount, N.M., Rawson, D.J., Robinson, C.M., Street, S.D.A., Summerhill, N.W.

(2006) J Med Chem 49: 3581

Released	2006-06-08
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	CGMP-SPECIFIC 3', 5'-CYCLIC PHOSPHODIESTERASE, CAMP-SPECIFIC 3', 5'-CYCLIC PHOSPHODIESTERASE 4B (protein)
Unique Ligands	3P4, MES, MG, ZN

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2DBE \| pdb_00002dbe	Download File View File

CRYSTAL STRUCTURE OF A BERENIL-DODECANUCLEOTIDE COMPLEX: THE ROLE OF WATER IN SEQUENCE-SPECIFIC LIGAND BINDING

Brown, D.G., Sanderson, M.R., Skelly, J.V., Jenkins, T.C., Brown, T., Garman, E., Stuart, D.I., Neidle, S.

(1990) EMBO J 9: 1329-1334

Released	1991-07-15
Method	X-RAY DIFFRACTION 2.5 Å
Macromolecule	DNA (5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3') (nucleic acid)
Unique Ligands	BRN

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2JEW \| pdb_00002jew	Download File View File

Crystal structure of ((2S)-5-amino-2-((1-n-propyl-1H-imidazol-4-yl) methyl)pentanoic acid) UK396,082 a TAFIa inhibitor, Bound to Activated Porcine Pancreatic carboxypeptidaseB

Brown, D.G., Moore, R.S.

(2007) J Med Chem 50: 6095-6103

Released	2007-11-20
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Sus scrofa
Macromolecule	CARBOXYPEPTIDASE B (protein)
Unique Ligands	720, ZN

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2VNT \| pdb_00002vnt	Download File View File

Urokinase-Type Plasminogen Activator Inhibitor Complex with a 1-(7- SULPHOAMIDOISOQUINOLINYL)GUANIDINE

Fish, P.V., Barber, C.G., Brown, D.G., Butt, R., Henry, B.T., Horne, V., Huggins, J.P., McCleverty, D., Phillips, C., Webster, R., Dickinson, R.P., Collis, M.G., King, E., O'Gara, M., McIntosh, F.

(2007) J Med Chem 50: 2341

Released	2008-02-19
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	UROKINASE-TYPE PLASMINOGEN ACTIVATOR (protein)
Unique Ligands	QGG, SO4

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2XDE \| pdb_00002xde	Download File View File

Crystal structure of the complex of PF-3450074 with an engineered HIV capsid N terminal domain

Brown, D.G., Irving, S.L., Anderson, M., Bazin, R.

(2010) PLoS Pathog 6: E1220

Released	2010-12-22
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	GAG POLYPROTEIN (protein)
Unique Ligands	1B0

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2YIY \| pdb_00002yiy	Download File View File

Crystal structure of compound 8 bound to TAK1-TAB

Brown, D.G., Phillips, C.

To be published

Released	2012-05-23
Method	X-RAY DIFFRACTION 2.49 Å
Organisms	Homo sapiens
Macromolecule	MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7, TGF-BETA-ACTIVATED KINASE 1 AND MAP3K7-BINDING PROTEIN 1 (protein)
Unique Ligands	YIY

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2YJA \| pdb_00002yja	Download File View File

Stapled Peptides binding to Estrogen Receptor alpha.

Phillips, C., Roberts, L.R., Schade, M., Bazin, R., Bent, A., Davies, N.L., Irving, S.L., Moore, R., Pannifer, A.D., Brown, D.G., Pickford, A.R., Scott, A., Xu, B.

(2011) J Am Chem Soc 133: 9696

Released	2011-08-03
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Homo sapiens
Macromolecule	ESTROGEN RECEPTOR (protein) STAPLED PEPTIDE (protein)
Unique Ligands	EST

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2YJD \| pdb_00002yjd	Download File View File

Stapled peptide bound to Estrogen Receptor Beta

Phillips, C., Roberts, L.R., Schade, M., Bent, A., Davies, N.L., Moore, R., Pannifer, A.D., Brown, D.G., Pickford, A.R., Irving, S.L.

(2011) J Am Chem Soc 133: 9696

Released	2011-08-03
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Homo sapiens
Macromolecule	ESTROGEN RECEPTOR BETA (protein) STAPLED PEPTIDE (protein)
Unique Ligands	YJD

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3HDZ \| pdb_00003hdz	Download File View File

Identification, Synthesis, and SAR of Amino Substituted Pyrido[3,2b]pryaziones as Potent and Selective PDE5 Inhibitors

Cubbage, J.W., Brown, D.G., Jacobsen, E.J., Walker, J.K., Hughes, R.O.

(2009) Bioorg Med Chem Lett 19: 4088-4091

Released	2009-07-07
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	cGMP-specific 3',5'-cyclic phosphodiesterase,cAMP-specific 3',5'-cyclic phosphodiesterase 4A,cGMP-specific 3',5'-cyclic phosphodiesterase (protein)
Unique Ligands	MG, PD6, ZN

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3ZVV \| pdb_00003zvv	Download File View File

Fragment Bound to PI3Kinase gamma

Hughes, S.J., Milan, D.S., Kilty, I.C., Lewthwaite, R.A., Mathias, J.P., O'Reilly, M.A., Phelan, A., Baldock, D.A., Brown, D.G.

(2011) Bioorg Med Chem Lett 21: 6586-6590

Released	2011-09-28
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE 3-KINASE CATALYTIC SUBUNIT GAMMA ISOFORM (protein)
Unique Ligands	XAZ

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3ZW3 \| pdb_00003zw3	Download File View File

Fragment based discovery of a novel and selective PI3 Kinase inhibitor

Brown, D.G., Hughes, S.J., Milan, D.S., Kilty, I.C., Lewthwaite, R.A., Mathias, J.P., O'Reilly, M.A., Pannifer, A., Phelan, A., Baldock, D.A.

(2011) Bioorg Med Chem Lett 21: 6586-6590

Released	2011-09-28
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE 3-KINASE CATALYTIC SUBUNIT GAMMA ISOFORM (protein)
Unique Ligands	ZW3

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4CZD \| pdb_00004czd	Download File View File

Sirohaem decarboxylase AhbA/B - an enzyme with structural homology to the Lrp/AsnC transcription factor family that is part of the alternative haem biosynthesis pathway.

Palmer, D.J., Brown, D.G., Warren, M.J.

(2014) Mol Microbiol 93: 247

Released	2014-06-11
Method	X-RAY DIFFRACTION 2.23 Å
Organisms	Desulfovibrio desulfuricans
Macromolecule	PUTATIVE TRANSCRIPTIONAL REGULATOR, ASNC FAMILY (protein)

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4UN1 \| pdb_00004un1	Download File View File

Sirohaem decarboxylase AhbA/B - an enzyme with structural homology to the Lrp/AsnC transcription factor family that is part of the alternative haem biosynthesis pathway.

Palmer, D.J., Brown, D.G., Warren, M.J., Pickersgill, R.W.

(2014) Mol Microbiol 93: 247

Released	2014-06-11
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Desulfovibrio desulfuricans
Macromolecule	PUTATIVE TRANSCRIPTIONAL REGULATOR, ASNC FAMILY (protein)
Unique Ligands	OBV

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1D63 | pdb_00001d63

1D65 | pdb_00001d65

1KI2 | pdb_00001ki2

1KIM | pdb_00001kim

295D | pdb_0000295d

296D | pdb_0000296d

2BTZ | pdb_00002btz

2BU2 | pdb_00002bu2

2BU5 | pdb_00002bu5

2BU6 | pdb_00002bu6

2BU7 | pdb_00002bu7

2BU8 | pdb_00002bu8

2CHM | pdb_00002chm

2DBE | pdb_00002dbe

2JEW | pdb_00002jew

2VNT | pdb_00002vnt

2XDE | pdb_00002xde

2YIY | pdb_00002yiy

2YJA | pdb_00002yja

2YJD | pdb_00002yjd

3HDZ | pdb_00003hdz

3ZVV | pdb_00003zvv

3ZW3 | pdb_00003zw3

4CZD | pdb_00004czd

4UN1 | pdb_00004un1